myRT

myRT report for GCA_000351705.1_Esch_coli_KTE76_V1

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Seq: KB732813.1 Escherichia coli KTE76 genomic scaffold acEnX-supercont1.2, whole genome shotgun sequence (2017750 bp)
Overview 1 RT 1: 64028-70059 bp Neighborhood of RT #1 [64028, 70196] SfsB RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 64028-64168 bp Ori: ELE63724.1 Feature: domain Description: SfsB Location: 64037-64109 bp Feature: domain Description: SfsB Location: 64037-641 09 bp Feature: gene Location: 64165-64635 bp Feature: gene Location: 64982-68191 bp Ori: ELE63726.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 65510-65999 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 6551 0-65999 bp Feature: domain Description: nitrilase Location: 67505-68102 bp Feature: domain Description: nitrilase Location: 67505-681 02 bp Feature: gene Location: 68507-69289 bp Ori: ELE63727.1 Feature: domain Description: AbiEi_3_N Location: 68519-68780 bp Feature: domain Description: AbiEi_3_N Location: 6851 9-68780 bp Feature: domain Description: AbiEi_3 Location: 68792-69248 bp Feature: domain Description: AbiEi_3 Location: 68792-69248 bp Feature: gene Location: 69276-70196 bp Ori: ELE63728.1 Feature: domain Description: AbiEii Location: 69318-70059 bp Feature: domain Description: AbiEii Location: 6931 8-70059 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SfsB (COG3423), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: KB732812.1 Escherichia coli KTE76 genomic scaffold acEnX-supercont1.1, whole genome shotgun sequence (161721 bp)
Overview 1 RT 1: 52025-56918 bp 2 RT 2: 121647-128532 bp 3 RT 3: 159974-161716 bp Neighborhood of RT #1 [52025, 56923] DUF1380 RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Neighborhood of RT #2 [121647, 128600] DDE_Tnp_Tn3 PHA02517 RVT-GII GIIM APH APH_6_hur Neighborhood of RT #3 [159974, 161721] InsE PHA02517 RVT-GII Feature: gene Location: 52025-52447 bp Ori: ELE64001.1 Feature: domain Description: DUF1380 Location: 52028-52322 bp Feature: domain Description: DUF1380 Location: 52 02 8-52 32 2 bp Feature: gene Location: 52444-52635 bp Feature: gene Location: 54085-55986 bp Ori: ELE64003.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54352-55183 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54352 -55183 bp Feature: domain Description: Intron_maturas2 Location: 55297-55555 bp Feature: domain Description: Intron_maturas2 Location: 552 97-55555 bp Feature: domain Description: HNHc Note: nucleases Location: 55729-55891 bp Feature: domain Description: HNHc Note: nucleases Location: 5572 9-55891 bp Feature: gene Location: 56181-56633 bp Ori: ELE64004.1 Feature: domain Description: PRK13732 Location: 56184-56631 bp Feature: domain Description: PRK13732 Location: 56184-56631 bp Feature: gene Location: 56690-56923 bp Ori: ELE64005.1 Feature: domain Description: DUF905 Location: 56720-56918 bp Feature: domain Description: DUF905 Location: 5672 0-56918 bp Feature: gene Location: 121647-123443 bp Ori: ELE63969.1 Feature: domain Description: DDE_Tnp_Tn3 Location: 122217-123375 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 12 2 2 17-12 3375 bp Feature: gene Location: 123925-124200 bp Ori: ELE63970.1 Feature: domain Description: PHA02517 Location: 123937-124135 bp Feature: domain Description: PHA02 517 Location: 12 3937-12 4135 bp Feature: gene Location: 124792-126315 bp Ori: ELE63971.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 125065-125797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 5065-12 5797 bp Feature: domain Description: GIIM Note: maturase Location: 125872-126070 bp Feature: domain Description: GIIM Note: maturase Location: 12 5872 -12 6070 bp Feature: gene Location: 126961-127764 bp Ori: ELE63972.1 Feature: domain Description: APH Location: 127003-127756 bp Feature: domain Description: APH Location: 12 7003-12 7756 bp Feature: gene Location: 127764-128600 bp Ori: ELE63973.1 Feature: domain Description: APH_6_hur Location: 127794-128532 bp Feature: domain Description: APH_6_hur Location: 12 7794-12 8532 bp Feature: gene Location: 159974-160300 bp Ori: ELE63812.1 Feature: domain Description: InsE Location: 159977-160298 bp Feature: domain Description: InsE Location: 159977-1602 98 bp Feature: gene Location: 160300-160779 bp Ori: ELE63813.1 Feature: domain Description: PHA02517 Location: 160360-160714 bp Feature: domain Description: PHA02 517 Location: 160360-160714 bp Feature: gene Location: 161371-161721 bp Ori: ELE63814.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 161644-161716 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 161644-161716 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1380 (pfam07128), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006), DDE_Tnp_Tn3 (pfam01526), PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388), APH (pfam01636)
APH_6_hur (pfam04655), InsE (COG2963)

Seq: KB732816.1 Escherichia coli KTE76 genomic scaffold acEnX-supercont1.5, whole genome shotgun sequence (609167 bp)
Overview 1 RT 1: 379434-384170 bp 2 RT 2: 403563-407049 bp Neighborhood of RT #1 [379434, 384277] InsE PHA02517 RVT-GII GIIM PHA02517 Inovirus_Gp2 Neighborhood of RT #2 [403563, 407063] Ntox28 CdiI_3 RVT-GII RVT-GII GIIM ArgR Feature: gene Location: 379434-379760 bp Ori: ELE55066.1 Feature: domain Description: InsE Location: 379437-379758 bp Feature: domain Description: InsE Location: 3 7943 7-3 79758 bp Feature: gene Location: 379760-380239 bp Ori: ELE55067.1 Feature: domain Description: PHA02517 Location: 379820-380174 bp Feature: domain Description: PHA02517 Location: 3 79820-3 80174 bp Feature: gene Location: 380831-382354 bp Ori: ELE55068.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 381104-381836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 81104-3 8183 6 bp Feature: domain Description: GIIM Note: maturase Location: 381911-382109 bp Feature: domain Description: GIIM Note: maturase Location: 3 81911-3 82109 bp Feature: gene Location: 382546-382917 bp Ori: ELE55069.1 Feature: domain Description: PHA02517 Location: 382549-382915 bp Feature: domain Description: PHA02517 Location: 3 82549-3 82915 bp Feature: gene Location: 383711-384277 bp Ori: ELE55070.1 Feature: domain Description: Inovirus_Gp2 Location: 383855-384170 bp Feature: domain Description: Inovirus_Gp2 Location: 3 83 855-3 84170 bp Feature: gene Location: 403563-403760 bp Ori: ELE54759.1 Feature: domain Description: Ntox28 Location: 403569-403686 bp Feature: domain Description: Ntox28 Location: 403 569-403 686 bp Feature: gene Location: 403757-404143 bp Ori: ELE54760.1 Feature: domain Description: CdiI_3 Location: 403781-404057 bp Feature: domain Description: CdiI_3 Location: 403 781-404057 bp Feature: gene Location: 404590-405072 bp Ori: ELE54761.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 404911-404998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 404911-404998 bp Feature: gene Location: 405069-405881 bp Ori: ELE54762.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 405078-405528 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 405078-405528 bp Feature: domain Description: GIIM Note: maturase Location: 405579-405744 bp Feature: domain Description: GIIM Note: maturase Location: 405579-405744 bp Feature: gene Location: 406131-406349 bp Feature: gene Location: 406587-407063 bp Ori: ELE54764.1 Feature: domain Description: ArgR Location: 406617-407049 bp Feature: domain Description: ArgR Location: 406617-407049 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Inovirus_Gp2 (pfam11726), Ntox28 (pfam15605), CdiI_3 (pfam18616), ArgR (COG1438)

Seq: KB732815.1 Escherichia coli KTE76 genomic scaffold acEnX-supercont1.4, whole genome shotgun sequence (1504711 bp)
Overview 1 RT 1: 407741-412486 bp 2 RT 2: 434429-439766 bp 3 RT 3: 629535-633266 bp Neighborhood of RT #1 [407741, 412486] InsE PHA02517 RVT-GII GIIM Neighborhood of RT #2 [434429, 439774] PFLE_PFLC RVT-GII RVT-GII GIIM YesM Neighborhood of RT #3 [629535, 633268] InsE PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 407741-408091 bp Ori: ELE58208.1 Feature: domain Description: InsE Location: 407750-408038 bp Feature: domain Description: InsE Location: 4 07750-4 08038 bp Feature: gene Location: 408196-408567 bp Ori: ELE58209.1 Feature: domain Description: PHA02517 Location: 408199-408565 bp Feature: domain Description: PHA02517 Location: 4 08199-4 08565 bp Feature: gene Location: 408759-410282 bp Ori: ELE58210.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 409032-409764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 09032-4 09764 bp Feature: domain Description: GIIM Note: maturase Location: 409839-410037 bp Feature: domain Description: GIIM Note: maturase Location: 4 09839-4 10037 bp Feature: gene Location: 411291-412115 bp Feature: gene Location: 412163-412486 bp Feature: gene Location: 434429-435346 bp Ori: ELE58236.1 Feature: domain Description: PFLE_PFLC Location: 434465-435320 bp Feature: domain Description: PFLE_PFLC Location: 4 34 4 65-4 35320 bp Feature: gene Location: 435483-436388 bp Feature: gene Location: 436874-437413 bp Ori: ELE58238.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 437204-437282 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 37204 -4 37282 bp Feature: gene Location: 437480-437962 bp Ori: ELE58239.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 437489-437729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 374 89-4 37729 bp Feature: domain Description: GIIM Note: maturase Location: 437777-437957 bp Feature: domain Description: GIIM Note: maturase Location: 4 37777-4 37957 bp Feature: gene Location: 438284-438472 bp Feature: gene Location: 438545-439774 bp Ori: ELE58241.1 Feature: domain Description: YesM Location: 439025-439766 bp Feature: domain Description: YesM Location: 4 39025-4 39766 bp Feature: gene Location: 629535-629786 bp Ori: ELE57683.1 Feature: domain Description: InsE Location: 629550-629736 bp Feature: domain Description: InsE Location: 629550-629736 bp Feature: gene Location: 629779-630153 bp Ori: ELE57684.1 Feature: domain Description: PHA02517 Location: 629782-630142 bp Feature: domain Description: PHA02517 Location: 629782-63014 2 bp Feature: gene Location: 630348-631871 bp Ori: ELE57685.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 630621-631353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 630621-631353 bp Feature: domain Description: GIIM Note: maturase Location: 631428-631626 bp Feature: domain Description: GIIM Note: maturase Location: 6314 28-631626 bp Feature: gene Location: 632463-632942 bp Ori: ELE57686.1 Feature: domain Description: PHA02517 Location: 632523-632877 bp Feature: domain Description: PHA02517 Location: 632523-632877 bp Feature: gene Location: 632942-633268 bp Ori: ELE57687.1 Feature: domain Description: InsE Location: 632945-633266 bp Feature: domain Description: InsE Location: 63294 5-633266 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PFLE_PFLC (TIGR02494), YesM (COG2972)