myRT

myRT report for GCA_000351745.1_Esch_coli_KTE80_V1

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Seq: KB732833.1 Escherichia coli KTE80 genomic scaffold acEnF-supercont1.16, whole genome shotgun sequence (602509 bp)
Overview 1 RT 1: 427770-431828 bp 2 RT 2: 445246-450457 bp Neighborhood of RT #1 [427770, 431962] HTH_ARSR RVT-GII GIIM IstB_IS21_ATP IstB_IS21 COG4584 COG4584 Neighborhood of RT #2 [445246, 450477] InsE RVT-GII GIIM PHA02517 InsE Feature: gene Location: 427770-428120 bp Feature: domain Description: HTH_ARSR Location: 427845-428064 bp Feature: domain Description: HTH_ARSR Location: 427845-428064 bp Feature: gene Location: 428459-428596 bp Feature: gene Location: 428938-429888 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 428947-429511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 428947-42951 1 bp Feature: domain Description: GIIM Note: maturase Location: 429589-429814 bp Feature: domain Description: GIIM Note: maturase Location: 429589-42981 4 bp Feature: gene Location: 430129-430884 bp Feature: domain Description: IstB_IS21_ATP Location: 430201-430285 bp Feature: domain Description: IstB_IS21 _ATP Location: 430201 -430285 bp Feature: domain Description: IstB_IS21 Location: 430294-430819 bp Feature: domain Description: IstB_IS21 Location: 430294-43081 9 bp Feature: gene Location: 430901-431962 bp Feature: domain Description: COG4584 Location: 430910-431300 bp Feature: domain Description: COG4584 Location: 43091 0-431 300 bp Feature: domain Description: COG4584 Location: 431414-431828 bp Feature: domain Description: COG4584 Location: 431 41 4-431 828 bp Feature: gene Location: 445246-445779 bp Feature: gene Location: 446573-446884 bp Feature: domain Description: InsE Location: 446576-446867 bp Feature: domain Description: InsE Location: 446576-446867 bp Feature: gene Location: 447928-449451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 448201-448933 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 448201 -448933 bp Feature: domain Description: GIIM Note: maturase Location: 449008-449206 bp Feature: domain Description: GIIM Note: maturase Location: 449008-449206 bp Feature: gene Location: 449580-449981 bp Feature: domain Description: PHA02517 Location: 449583-449967 bp Feature: domain Description: PHA0251 7 Location: 449583-449967 bp Feature: gene Location: 450052-450477 bp Feature: domain Description: InsE Location: 450067-450457 bp Feature: domain Description: InsE Location: 450067-450457 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_ARSR (smart00418), RVT-GII, GIIM (pfam08388), IstB_IS21_ATP (pfam08483), IstB_IS21 (pfam01695), COG4584 (Transposase ), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed)

Seq: KB732837.1 Escherichia coli KTE80 genomic scaffold acEnF-supercont1.2, whole genome shotgun sequence (54302 bp)
Overview 1 RT 1: 38149-44704 bp Neighborhood of RT #1 [38149, 44704] DDE_Tnp_1_assoc RVT-GII GIIM YhhI YhhI Feature: gene Location: 38149-39111 bp Feature: gene Location: 39424-39689 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 39427-39688 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 3942 7-39688 bp Feature: gene Location: 40743-41993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40947-41604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40947-41604 bp Feature: domain Description: GIIM Note: maturase Location: 41685-41907 bp Feature: domain Description: GIIM Note: maturase Location: 41685-41907 bp Feature: gene Location: 43001-43452 bp Feature: domain Description: YhhI Location: 43007-43145 bp Feature: domain Description: YhhI Location: 43007-43145 bp Feature: domain Description: YhhI Location: 43202-43448 bp Feature: domain Description: YhhI Location: 432 02 -43448 bp Feature: gene Location: 44201-44704 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_assoc (pfam13808), RVT-GII, GIIM (pfam08388), YhhI (COG5433)