myRT

myRT report for GCA_000351785.1_Esch_coli_KTE83_V1

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Seq: KB733414.1 Escherichia coli KTE83 genomic scaffold acEnD-supercont1.5, whole genome shotgun sequence (1699669 bp)
Overview 1 RT 1: 1000776-1008428 bp Neighborhood of RT #1 [1000776, 1008428] DUF4917 AAA_15 RVT-Retrons Nuc_deoxyrib_tr Feature: gene Location: 1000776-1001795 bp Feature: domain Description: DUF4917 Location: 1000836-1001760 bp Feature: domain Description: DUF491 7 Location: 1 000836-1 001 760 bp Feature: gene Location: 1003194-1005440 bp Feature: domain Description: AAA_15 Location: 1003197-1004205 bp Feature: domain Description: AAA_1 5 Location: 1 0031 97-1 004205 bp Feature: gene Location: 1005555-1006655 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1005738-1006266 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 005738-1 006266 bp Feature: gene Location: 1007311-1008180 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 1007833-1008004 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 1 007833-1 008004 bp Feature: gene Location: 1008177-1008428 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4917 (pfam16263), AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014)

Seq: KB733411.1 Escherichia coli KTE83 genomic scaffold acEnD-supercont1.2, whole genome shotgun sequence (449540 bp)
Overview 1 RT 1: 38146-44574 bp Neighborhood of RT #1 [38146, 44574] YhhI YhhI YhhI RVT-GII GIIM YhhI YhhI YhhI Feature: gene Location: 38146-39108 bp Feature: gene Location: 39421-40377 bp Feature: domain Description: YhhI Location: 39424-39769 bp Feature: domain Description: YhhI Location: 3942 4-39769 bp Feature: domain Description: YhhI Location: 39826-40180 bp Feature: domain Description: YhhI Location: 3982 6-40180 bp Feature: domain Description: YhhI Location: 40180-40360 bp Feature: domain Description: YhhI Location: 40180-40360 bp Feature: gene Location: 40909-42159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41113-41770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41113-41770 bp Feature: domain Description: GIIM Note: maturase Location: 41851-42073 bp Feature: domain Description: GIIM Note: maturase Location: 41851-42 073 bp Feature: gene Location: 42815-43951 bp Feature: domain Description: YhhI Location: 42818-43181 bp Feature: domain Description: YhhI Location: 42 818-43181 bp Feature: domain Description: YhhI Location: 43238-43592 bp Feature: domain Description: YhhI Location: 432 38-43592 bp Feature: domain Description: YhhI Location: 43610-43853 bp Feature: domain Description: YhhI Location: 43610-43853 bp Feature: gene Location: 44071-44574 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), RVT-GII, GIIM (pfam08388)