myRT

myRT report for GCA_000351825.1_Esch_coli_KTE87_V1

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Seq: KB732880.1 Escherichia coli KTE87 genomic scaffold acEvx-supercont1.2, whole genome shotgun sequence (114144 bp)
Overview 1 RT 1: 31736-36618 bp 2 RT 2: 94318-99060 bp 3 RT 3: 109904-113692 bp Neighborhood of RT #1 [31736, 36623] AdoMet_MTases RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Neighborhood of RT #2 [94318, 99080] PRK10173 PRK10173 RVT-GII rve PRK08181 Neighborhood of RT #3 [109904, 113730] InsE PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 31736-32299 bp Ori: ELE93365.1 Feature: domain Description: AdoMet_MTases Location: 31898-32198 bp Feature: domain Description: AdoMet_MTases Location: 31 898-321 98 bp Feature: gene Location: 32299-32535 bp Feature: gene Location: 33797-35698 bp Ori: ELE93367.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34064-34895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34064-34895 bp Feature: domain Description: Intron_maturas2 Location: 35009-35267 bp Feature: domain Description: Intron_maturas2 Location: 35009-35267 bp Feature: domain Description: HNHc Note: nucleases Location: 35441-35603 bp Feature: domain Description: HNHc Note: nucleases Location: 35441 -35603 bp Feature: gene Location: 35893-36333 bp Ori: ELE93368.1 Feature: domain Description: PRK13732 Location: 35896-36331 bp Feature: domain Description: PRK1 3732 Location: 35896-36331 bp Feature: gene Location: 36390-36623 bp Ori: ELE93369.1 Feature: domain Description: DUF905 Location: 36420-36618 bp Feature: domain Description: DUF905 Location: 36420-3661 8 bp Feature: gene Location: 94318-94767 bp Ori: ELE93433.1 Feature: domain Description: PRK10173 Location: 94321-94759 bp Feature: domain Description: PRK1 01 73 Location: 94321 -94759 bp Feature: gene Location: 94742-95062 bp Ori: ELE93434.1 Feature: domain Description: PRK10173 Location: 94745-94973 bp Feature: domain Description: PRK1 01 73 Location: 94745-94973 bp Feature: gene Location: 95101-95370 bp Ori: ELE93435.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95140-95212 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 951 40-9521 2 bp Feature: gene Location: 96829-98328 bp Ori: ELE93136.1 Feature: domain Description: rve Location: 97201-97594 bp Feature: domain Description: rve Location: 97201 -97594 bp Feature: gene Location: 98325-99080 bp Ori: ELE93137.1 Feature: domain Description: PRK08181 Location: 98349-99060 bp Feature: domain Description: PRK081 81 Location: 98349-99060 bp Feature: gene Location: 109904-110230 bp Ori: ELE93150.1 Feature: domain Description: InsE Location: 109907-110228 bp Feature: domain Description: InsE Location: 1 09907-1 1 0228 bp Feature: gene Location: 110230-110709 bp Ori: ELE93151.1 Feature: domain Description: PHA02517 Location: 110290-110644 bp Feature: domain Description: PHA0251 7 Location: 1 1 0290-1 1 0644 bp Feature: gene Location: 111301-112824 bp Ori: ELE93152.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 111574-112306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 574-1 1 2306 bp Feature: domain Description: GIIM Note: maturase Location: 112381-112579 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 2381 -1 1 2579 bp Feature: gene Location: 112941-113297 bp Ori: ELE93153.1 Feature: domain Description: PHA02517 Location: 112944-113253 bp Feature: domain Description: PHA0251 7 Location: 1 1 2944-1 1 3253 bp Feature: gene Location: 113326-113730 bp Ori: ELE93154.1 Feature: domain Description: InsE Location: 113356-113692 bp Feature: domain Description: InsE Location: 1 1 3356-1 1 3692 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AdoMet_MTases (cl17173), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), rve (pfam00665), PRK08181 (transposase; Validated), InsE (COG2963)
PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388)