myRT

myRT report for GCA_000351925.1_Esch_coli_KTE142_V1

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Seq: KB732916.1 Escherichia coli KTE142 genomic scaffold acEnG-supercont1.5, whole genome shotgun sequence (4668452 bp)
Overview 1 RT 1: 1196586-1201926 bp 2 RT 2: 3993449-4000039 bp Neighborhood of RT #1 [1196586, 1202438] SLATT_5 RVT-UG17 Caudo_TAP phage_tail_N Collar Neighborhood of RT #2 [3993449, 4000056] phage_tail_N 7tmA_amine_R-like 34 Collar Phage_fiber Phage_fiber Phage_fiber Phage_fiber Caudo_TAP RVT-Retrons TIR_2 PRK10597 Feature: gene Location: 1196586-1196684 bp Feature: gene Location: 1197050-1197601 bp Ori: ELF13105.1 Feature: domain Description: SLATT_5 Location: 1197059-1197572 bp Feature: domain Description: SLATT_5 Location: 1 1 97059-1 1 97572 bp Feature: gene Location: 1197579-1198949 bp Ori: ELF13106.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1197807-1198413 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 1 97807-1 1 9841 3 bp Feature: gene Location: 1199062-1199646 bp Ori: ELF13107.1 Feature: domain Description: Caudo_TAP Location: 1199278-1199635 bp Feature: domain Description: Caudo_TAP Location: 1 1 99278-1 1 99635 bp Feature: gene Location: 1199646-1202438 bp Ori: ELF13108.1 Feature: domain Description: phage_tail_N Location: 1199649-1200048 bp Feature: domain Description: phage_tail_N Location: 1 1 99649-1 200048 bp Feature: domain Description: Collar Location: 1201788-1201926 bp Feature: domain Description: Collar Location: 1 201 788-1 201 926 bp Feature: gene Location: 3993449-3996799 bp Ori: ELF06807.1 Feature: domain Description: phage_tail_N Location: 3993452-3993851 bp Feature: domain Description: phage_tail_N Location: 3993452-3993851 bp Feature: domain Description: 7tmA_amine_R-like Location: 3994331-3994769 bp Feature: domain Description: 7tmA_amine_R-like Location: 3994331 -3994769 bp Feature: domain Description: 34 Location: 3995549-3995882 bp Feature: domain Description: 34 Location: 3995549-3995882 bp Feature: domain Description: Collar Location: 3996167-3996305 bp Feature: domain Description: Collar Location: 39961 67-3996305 bp Feature: domain Description: Phage_fiber Location: 3996356-3996392 bp Feature: domain Description: Phage_fiber Location: 3996356-3996392 bp Feature: domain Description: Phage_fiber Location: 3996452-3996491 bp Feature: domain Description: Phage_fiber Location: 3996452-3996491 bp Feature: domain Description: Phage_fiber Location: 3996602-3996641 bp Feature: domain Description: Phage_fiber Location: 3996602-3996641 bp Feature: domain Description: Phage_fiber Location: 3996647-3996680 bp Feature: domain Description: Phage_fiber Location: 3996647-3996680 bp Feature: gene Location: 3996799-3997383 bp Ori: ELF06808.1 Feature: domain Description: Caudo_TAP Location: 3997015-3997372 bp Feature: domain Description: Caudo_TAP Location: 399701 5-3997372 bp Feature: gene Location: 3997829-3999457 bp Ori: ELF06809.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3998144-3998735 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 39981 44-3998735 bp Feature: domain Description: TIR_2 Location: 3999062-3999350 bp Feature: domain Description: TIR_2 Location: 3999062-3999350 bp Feature: gene Location: 3999630-3999875 bp Feature: gene Location: 3999796-4000056 bp Ori: ELF06811.1 Feature: domain Description: PRK10597 Location: 3999799-4000039 bp Feature: domain Description: PRK1 0597 Location: 3999799-4000039 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, Caudo_TAP (pfam02413), phage_tail_N (pfam08400), Collar (pfam07484), 7tmA_amine_R-like (cd14967), 34 (PHA02584), Phage_fiber (pfam03335), RVT-Retrons, TIR_2 (pfam13676)
PRK10597 (DNA damage-inducible protein I; Provisional)