myRT

myRT report for GCA_000351985.1_Esch_coli_KTE161_V1

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Seq: KB732934.1 Escherichia coli KTE161 genomic scaffold acEof-supercont1.1, whole genome shotgun sequence (2371544 bp)
Overview 1 RT 1: 1187374-1193933 bp 2 RT 2: 1939206-1944106 bp Neighborhood of RT #1 [1187374, 1193965] TPR ANAPC3 TPR_16 InsE RVT-GII GIIM PHA02517 MFS_SLC46_TetA_like Neighborhood of RT #2 [1939206, 1944108] PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 1187374-1188417 bp Feature: domain Description: TPR Location: 1187518-1187641 bp Feature: domain Description: TPR Location: 1 1 8751 8-1 1 87641 bp Feature: domain Description: ANAPC3 Location: 1187761-1187902 bp Feature: domain Description: ANAPC3 Location: 1 1 87761 -1 1 87902 bp Feature: domain Description: TPR_16 Location: 1187923-1187989 bp Feature: domain Description: TPR_1 6 Location: 1 1 87923-1 1 87989 bp Feature: gene Location: 1188849-1188917 bp Feature: domain Description: InsE Location: 1188852-1188918 bp Feature: domain Description: InsE Location: 1 1 88852-1 1 8891 8 bp Feature: gene Location: 1190029-1191552 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1190302-1191034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 90302-1 1 91 034 bp Feature: domain Description: GIIM Note: maturase Location: 1191109-1191307 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 91 1 09-1 1 91 307 bp Feature: gene Location: 1191744-1192115 bp Feature: domain Description: PHA02517 Location: 1191747-1192113 bp Feature: domain Description: PHA0251 7 Location: 1 1 91 747-1 1 921 1 3 bp Feature: gene Location: 1192772-1193965 bp Feature: domain Description: MFS_SLC46_TetA_like Location: 1192853-1193933 bp Feature: domain Description: MFS_SLC46_TetA_like Location: 1 1 92853-1 1 93933 bp Feature: gene Location: 1939206-1939499 bp Feature: gene Location: 1939587-1939958 bp Feature: domain Description: PHA02517 Location: 1939590-1939956 bp Feature: domain Description: PHA0251 7 Location: 1 939590-1 939956 bp Feature: gene Location: 1940150-1941673 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1940423-1941155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 940423-1 941 1 55 bp Feature: domain Description: GIIM Note: maturase Location: 1941230-1941428 bp Feature: domain Description: GIIM Note: maturase Location: 1 941 230-1 941 428 bp Feature: gene Location: 1943550-1943782 bp Feature: domain Description: PHA02517 Location: 1943610-1943781 bp Feature: domain Description: PHA0251 7 Location: 1 94361 0-1 943781 bp Feature: gene Location: 1943782-1944108 bp Feature: domain Description: InsE Location: 1943785-1944106 bp Feature: domain Description: InsE Location: 1 943785-1 9441 06 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR (smart00028), ANAPC3 (pfam12895), TPR_16 (pfam13432), InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), MFS_SLC46_TetA_like (cd17330)

Seq: KB732935.1 Escherichia coli KTE161 genomic scaffold acEof-supercont1.2, whole genome shotgun sequence (82266 bp)
Overview 1 RT 1: 57669-62885 bp Neighborhood of RT #1 [57669, 63067] PinE RVT-GII GIIM PRK09413 lnt Feature: gene Location: 57669-58226 bp Feature: domain Description: PinE Location: 57672-58221 bp Feature: domain Description: PinE Location: 57672 -582 2 1 bp Feature: gene Location: 58326-58727 bp Feature: gene Location: 58936-60288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59257-59875 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 592 57-59875 bp Feature: domain Description: GIIM Note: maturase Location: 59923-60154 bp Feature: domain Description: GIIM Note: maturase Location: 5992 3-60154 bp Feature: gene Location: 60764-60961 bp Feature: domain Description: PRK09413 Location: 60767-60929 bp Feature: domain Description: PRK09413 Location: 60767-6092 9 bp Feature: gene Location: 61856-63067 bp Feature: domain Description: lnt Location: 62159-62885 bp Feature: domain Description: lnt Location: 62 159-62 885 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, GIIM (pfam08388), PRK09413 (IS2 repressor TnpA; Reviewed), lnt (TIGR00546)