myRT

myRT report for GCA_000352065.1_Esch_coli_KTE6_V1

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Seq: KB732993.1 Escherichia coli KTE6 genomic scaffold acASz-supercont1.3, whole genome shotgun sequence (4617420 bp)
Overview 1 RT 1: 803560-807507 bp 2 RT 2: 3121012-3127354 bp Neighborhood of RT #1 [803560, 807509] zinc_ribbon_11 PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #2 [3121012, 3127354] PRK11388 RVT-Retrons Feature: gene Location: 803560-804060 bp Ori: ELF48242.1 Feature: domain Description: zinc_ribbon_11 Location: 803677-803995 bp Feature: domain Description: zinc_ribbon_1 1 Location: 803677-803995 bp Feature: gene Location: 804026-804472 bp Ori: ELF48243.1 Feature: domain Description: PHA02517 Location: 804029-804470 bp Feature: domain Description: PHA0251 7 Location: 804029-804470 bp Feature: gene Location: 804589-806112 bp Ori: ELF48244.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 804862-805594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 804862-805594 bp Feature: domain Description: GIIM Note: maturase Location: 805669-805867 bp Feature: domain Description: GIIM Note: maturase Location: 805669-805867 bp Feature: gene Location: 806704-807183 bp Ori: ELF48245.1 Feature: domain Description: PHA02517 Location: 806764-807118 bp Feature: domain Description: PHA0251 7 Location: 806764-8071 1 8 bp Feature: gene Location: 807183-807509 bp Ori: ELF48246.1 Feature: domain Description: InsE Location: 807186-807507 bp Feature: domain Description: InsE Location: 8071 86-807507 bp Feature: gene Location: 3121012-3122931 bp Ori: ELF44826.1 Feature: domain Description: PRK11388 Location: 3121015-3122923 bp Feature: domain Description: PRK1 1 388 Location: 31 21 01 5-31 22923 bp Feature: gene Location: 3123413-3123652 bp Feature: gene Location: 3124223-3125980 bp Ori: ELF44828.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3124367-3124985 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31 24367-31 24985 bp Feature: gene Location: 3126002-3126169 bp Feature: gene Location: 3126227-3127354 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT zinc_ribbon_11 (pfam11682), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), PRK11388 (DNA-binding transcriptional regulator DhaR; Provisional), RVT-Retrons

Seq: KB732991.1 Escherichia coli KTE6 genomic scaffold acASz-supercont1.1, whole genome shotgun sequence (113997 bp)
Overview 1 RT 1: 93978-98589 bp 2 RT 2: 109433-113221 bp Neighborhood of RT #1 [93978, 98609] PRK10173 PRK10173 RVT-GII rve PRK08181 Neighborhood of RT #2 [109433, 113259] InsE PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 93978-94427 bp Ori: ELF50048.1 Feature: domain Description: PRK10173 Location: 93981-94419 bp Feature: domain Description: PRK10173 Location: 93981-94419 bp Feature: gene Location: 94402-94722 bp Ori: ELF50049.1 Feature: domain Description: PRK10173 Location: 94405-94633 bp Feature: domain Description: PRK10173 Location: 94405-94633 bp Feature: gene Location: 94761-95264 bp Ori: ELF50050.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95034-95103 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95034-95103 bp Feature: gene Location: 96358-97857 bp Ori: ELF50051.1 Feature: domain Description: rve Location: 96730-97123 bp Feature: domain Description: rve Location: 96730-9712 3 bp Feature: gene Location: 97854-98609 bp Ori: ELF50052.1 Feature: domain Description: PRK08181 Location: 97878-98589 bp Feature: domain Description: PRK08181 Location: 97878-98589 bp Feature: gene Location: 109433-109759 bp Ori: ELF50064.1 Feature: domain Description: InsE Location: 109436-109757 bp Feature: domain Description: InsE Location: 109436-109757 bp Feature: gene Location: 109759-110238 bp Ori: ELF50065.1 Feature: domain Description: PHA02517 Location: 109819-110173 bp Feature: domain Description: PHA02 517 Location: 109819-110173 bp Feature: gene Location: 110830-112353 bp Ori: ELF50066.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 111103-111835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 111103-111835 bp Feature: domain Description: GIIM Note: maturase Location: 111910-112108 bp Feature: domain Description: GIIM Note: maturase Location: 111910-112 108 bp Feature: gene Location: 112470-112826 bp Ori: ELF50067.1 Feature: domain Description: PHA02517 Location: 112473-112782 bp Feature: domain Description: PHA02 517 Location: 112 473-112 782 bp Feature: gene Location: 112855-113259 bp Ori: ELF50068.1 Feature: domain Description: InsE Location: 112885-113221 bp Feature: domain Description: InsE Location: 112 885-1132 2 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII, rve (pfam00665), PRK08181 (transposase; Validated), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388)