myRT

myRT report for GCA_000352285.1_Esch_coli_KTE46_V1

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Seq: KB733029.1 Escherichia coli KTE46 genomic scaffold acASD-supercont1.1, whole genome shotgun sequence (113097 bp)
Overview 1 RT 1: 11316-15939 bp 2 RT 2: 110902-112852 bp Neighborhood of RT #1 [11316, 15947] PRK08181 rve RVT-GII PRK10173 PRK10173 Neighborhood of RT #2 [110902, 113097] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 11316-12071 bp Ori: ELG00510.1 Feature: domain Description: PRK08181 Location: 11340-12051 bp Feature: domain Description: PRK081 81 Location: 1 1 340-1 2051 bp Feature: gene Location: 12068-13567 bp Ori: ELG00511.1 Feature: domain Description: rve Location: 12440-12833 bp Feature: domain Description: rve Location: 1 2440-1 2833 bp Feature: gene Location: 14661-15164 bp Ori: ELG00512.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14934-15003 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4934-1 5003 bp Feature: gene Location: 15203-15523 bp Ori: ELG00513.1 Feature: domain Description: PRK10173 Location: 15206-15434 bp Feature: domain Description: PRK1 01 73 Location: 1 5206-1 5434 bp Feature: gene Location: 15498-15947 bp Ori: ELG00514.1 Feature: domain Description: PRK10173 Location: 15501-15939 bp Feature: domain Description: PRK1 01 73 Location: 1 5501 -1 5939 bp Feature: gene Location: 110902-111306 bp Ori: ELG00622.1 Feature: domain Description: InsE Location: 110932-111268 bp Feature: domain Description: InsE Location: 1 1 0932-1 1 1 268 bp Feature: gene Location: 111335-111691 bp Ori: ELG00623.1 Feature: domain Description: PHA02517 Location: 111338-111647 bp Feature: domain Description: PHA0251 7 Location: 1 1 1 338-1 1 1 647 bp Feature: gene Location: 111808-113097 bp Ori: ELG00624.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 111847-112579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 847-1 1 2579 bp Feature: domain Description: GIIM Note: maturase Location: 112654-112852 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 2654-1 1 2852 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08181 (transposase; Validated), rve (pfam00665), RVT-GII, PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388)