myRT

myRT report for GCA_000352525.1_Esch_coli_KTE115_V1

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Seq: KB733435.1 Escherichia coli KTE115 genomic scaffold acATp-supercont1.2, whole genome shotgun sequence (2794411 bp)
Overview 1 RT 1: 63181-69212 bp 2 RT 2: 2101852-2107715 bp Neighborhood of RT #1 [63181, 69349] SfsB RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Neighborhood of RT #2 [2101852, 2107729] PRK13381 DcuC RVT-GII Asparaginase_2 DUF5339 Feature: gene Location: 63181-63321 bp Ori: ELG55020.1 Feature: domain Description: SfsB Location: 63190-63262 bp Feature: domain Description: SfsB Location: 631 90-63262 bp Feature: gene Location: 63318-63788 bp Feature: gene Location: 64135-67344 bp Ori: ELG55022.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 64663-65152 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 64663-651 52 bp Feature: domain Description: nitrilase Location: 66658-67255 bp Feature: domain Description: nitrilase Location: 66658-67255 bp Feature: gene Location: 67660-68442 bp Ori: ELG55023.1 Feature: domain Description: AbiEi_3_N Location: 67672-67933 bp Feature: domain Description: AbiEi_3_N Location: 67672-67933 bp Feature: domain Description: AbiEi_3 Location: 67945-68401 bp Feature: domain Description: AbiEi_3 Location: 67945-68401 bp Feature: gene Location: 68429-69349 bp Ori: ELG55024.1 Feature: domain Description: AbiEii Location: 68471-69212 bp Feature: domain Description: AbiEii Location: 68471 -6921 2 bp Feature: gene Location: 2101852-2103108 bp Ori: ELG51291.1 Feature: domain Description: PRK13381 Location: 2101858-2103073 bp Feature: domain Description: PRK1 3381 Location: 21 01 858-21 03073 bp Feature: gene Location: 2103105-2104466 bp Ori: ELG51292.1 Feature: domain Description: DcuC Location: 2103108-2104440 bp Feature: domain Description: DcuC Location: 21 031 08-21 04440 bp Feature: gene Location: 2105112-2105558 bp Ori: ELG51293.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2105418-2105520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 0541 8-21 05520 bp Feature: gene Location: 2106082-2107113 bp Ori: ELG51294.1 Feature: domain Description: Asparaginase_2 Location: 2106172-2107105 bp Feature: domain Description: Asparaginase_2 Location: 21 061 72-21 071 05 bp Feature: gene Location: 2107451-2107729 bp Ori: ELG51295.1 Feature: domain Description: DUF5339 Location: 2107514-2107715 bp Feature: domain Description: DUF5339 Location: 21 0751 4-21 0771 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SfsB (COG3423), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843), PRK13381 (peptidase T; Provisional), DcuC (TIGR00771), RVT-GII, Asparaginase_2 (pfam01112)
DUF5339 (pfam17274)