myRT

myRT report for GCA_000352745.1_Esch_coli_KTE158_V1

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Seq: KB733136.1 Escherichia coli KTE158 genomic scaffold acATh-supercont1.1, whole genome shotgun sequence (1307174 bp)
Overview 1 RT 1: 911061-917760 bp Neighborhood of RT #1 [911061, 917760] DDE_Tnp_1_assoc RVT-GII GIIM DDE_Tnp_1_assoc Feature: gene Location: 911061-912023 bp Feature: gene Location: 912336-912663 bp Ori: ELH03009.1 Feature: domain Description: DDE_Tnp_1_assoc Location: 912339-912600 bp Feature: domain Description: DDE_Tnp_1 _assoc Location: 91 2339-91 2600 bp Feature: gene Location: 914127-915377 bp Ori: ELH02976.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 914331-914988 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 4331 -91 4988 bp Feature: domain Description: GIIM Note: maturase Location: 915069-915291 bp Feature: domain Description: GIIM Note: maturase Location: 91 5069-91 5291 bp Feature: gene Location: 915824-916233 bp Ori: ELH02977.1 Feature: domain Description: DDE_Tnp_1_assoc Location: 915845-916106 bp Feature: domain Description: DDE_Tnp_1 _assoc Location: 91 5845-91 61 06 bp Feature: gene Location: 917257-917760 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_assoc (pfam13808), RVT-GII, GIIM (pfam08388)

Seq: KB733140.1 Escherichia coli KTE158 genomic scaffold acATh-supercont1.5, whole genome shotgun sequence (2989876 bp)
Overview 1 RT 1: 986453-993378 bp Neighborhood of RT #1 [986453, 994268] Q RVT-Retrons RVT-AbiP2 Phage_GPA Feature: gene Location: 986453-987472 bp Ori: ELG98537.1 Feature: domain Description: Q Location: 986456-987467 bp Feature: domain Description: Q Location: 986456-987467 bp Feature: gene Location: 987515-988222 bp Feature: gene Location: 988219-989403 bp Ori: ELG98539.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 988363-988945 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 988363-988945 bp Feature: gene Location: 989468-989584 bp Feature: gene Location: 989960-991504 bp Ori: ELG98541.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 990377-990830 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 990377-990830 bp Feature: gene Location: 991670-991888 bp Feature: gene Location: 991992-994268 bp Ori: ELG98543.1 Feature: domain Description: Phage_GPA Location: 992391-993378 bp Feature: domain Description: Phage_GPA Location: 992 391-993378 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Q (PHA02536), RVT-Retrons, RVT-AbiP2, Phage_GPA (pfam05840)