myRT

myRT report for GCA_000352765.1_Esch_coli_KTE165_V1

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Seq: KB733141.1 Escherichia coli KTE165 genomic scaffold acASx-supercont1.1, whole genome shotgun sequence (4753629 bp)
Overview 1 RT 1: 1132342-1138449 bp 2 RT 2: 4224559-4229868 bp Neighborhood of RT #1 [1132342, 1138541] PRK11462 PRK09692 RVT-UG15 Psu PRK09678 PRK09678 Neighborhood of RT #2 [4224559, 4229885] ABC_ATPase RVT-Retrons Phage_GPA DUF5405 Feature: gene Location: 1132342-1133724 bp Ori: ELH12166.1 Feature: domain Description: PRK11462 Location: 1132345-1133722 bp Feature: domain Description: PRK1 1 462 Location: 1 1 32345-1 1 33722 bp Feature: gene Location: 1134274-1135443 bp Ori: ELH12167.1 Feature: domain Description: PRK09692 Location: 1134283-1135426 bp Feature: domain Description: PRK09692 Location: 1 1 34283-1 1 35426 bp Feature: gene Location: 1135461-1137071 bp Ori: ELH12168.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 1135869-1136292 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 1 1 35869-1 1 36292 bp Feature: gene Location: 1137395-1137967 bp Ori: ELH12169.1 Feature: domain Description: Psu Location: 1137413-1137950 bp Feature: domain Description: Psu Location: 1 1 3741 3-1 1 37950 bp Feature: gene Location: 1138041-1138541 bp Ori: ELH12170.1 Feature: domain Description: PRK09678 Location: 1138044-1138176 bp Feature: domain Description: PRK09678 Location: 1 1 38044-1 1 381 76 bp Feature: domain Description: PRK09678 Location: 1138299-1138449 bp Feature: domain Description: PRK09678 Location: 1 1 38299-1 1 38449 bp Feature: gene Location: 4224559-4224675 bp Feature: gene Location: 4224680-4226032 bp Ori: ELH03675.1 Feature: domain Description: ABC_ATPase Location: 4224740-4225463 bp Feature: domain Description: ABC_ATPase Location: 4224740-4225463 bp Feature: gene Location: 4226034-4227023 bp Ori: ELH03676.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4226151-4226712 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 42261 51 -422671 2 bp Feature: gene Location: 4227350-4229620 bp Ori: ELH03677.1 Feature: domain Description: Phage_GPA Location: 4227749-4228736 bp Feature: domain Description: Phage_GPA Location: 4227749-4228736 bp Feature: gene Location: 4229610-4229885 bp Ori: ELH03678.1 Feature: domain Description: DUF5405 Location: 4229628-4229868 bp Feature: domain Description: DUF5405 Location: 4229628-4229868 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11462 (putative transporter; Provisional), PRK09692 (Integrase; provisional), RVT-UG15, Psu (pfam07455), PRK09678 (DNA-binding transcriptional regulator; Provisional), ABC_ATPase (pfam09818), RVT-Retrons, Phage_GPA (pfam05840), DUF5405 (pfam17399)