myRT

myRT report for GCA_000353285.1_ASM35328v1

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Seq: KB731325.1 Leptolyngbya boryana PCC 6306 genomic scaffold LepboDRAFT_LPC.2, whole genome shotgun sequence (521445 bp)
Overview 1 RT 1: 3452-9531 bp Neighborhood of RT #1 [3452, 9531] YjbI YjbI RVT_N RVT-GII GIIM HNH InsB Feature: gene Location: 3452-3610 bp Feature: gene Location: 4290-6311 bp Feature: domain Description: YjbI Location: 4320-4452 bp Feature: domain Description: YjbI Location: 4320-4452 bp Feature: domain Description: YjbI Location: 5046-5901 bp Feature: domain Description: YjbI Location: 5046-5901 bp Feature: gene Location: 6495-8177 bp Feature: RT Description: RVT_N Location: 6540-6738 bp Feature: RT Description: RVT_N Location: 6540-6738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6786-7443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6786-7443 bp Feature: domain Description: GIIM Note: maturase Location: 7548-7776 bp Feature: domain Description: GIIM Note: maturase Location: 7548-7776 bp Feature: domain Description: HNH Note: nucleases Location: 7986-8121 bp Feature: domain Description: HNH Note: nucleases Location: 7986-81 21 bp Feature: gene Location: 8924-9241 bp Feature: domain Description: InsB Location: 8939-9179 bp Feature: domain Description: InsB Location: 8939-91 79 bp Feature: gene Location: 9334-9531 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YjbI (COG2346), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), InsB (COG1662)

Seq: KB731326.1 Leptolyngbya boryana PCC 6306 genomic scaffold LepboDRAFT_LPC.3, whole genome shotgun sequence (413092 bp)
Overview 1 RT 1: 179673-183663 bp 2 RT 2: 186398-194670 bp Neighborhood of RT #1 [179673, 183663] AraC_N AraC RVT_N RVT-GII GIIM HNH Neighborhood of RT #2 [186398, 194762] GIIM HNH RVT-GII RVT-GII GIIM McrA RVT-GII GIIM HNHc RVT_N RVT-GII RVT_N RVT-GII INT_Rci_Hp1_C Feature: gene Location: 179673-180656 bp Feature: domain Description: AraC_N Location: 179826-180276 bp Feature: domain Description: AraC_N Location: 17982 6-1802 76 bp Feature: domain Description: AraC Location: 180309-180618 bp Feature: domain Description: AraC Location: 180309-180618 bp Feature: gene Location: 180700-180900 bp Feature: gene Location: 181338-183053 bp Feature: RT Description: RVT_N Location: 181392-181638 bp Feature: RT Description: RVT_N Location: 181392 -181638 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 181686-182364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 181686-182 364 bp Feature: domain Description: GIIM Note: maturase Location: 182430-182652 bp Feature: domain Description: GIIM Note: maturase Location: 182 430-182 652 bp Feature: domain Description: HNH Note: nucleases Location: 182904-183039 bp Feature: domain Description: HNH Note: nucleases Location: 182 904-183039 bp Feature: gene Location: 182992-183240 bp Feature: gene Location: 183523-183663 bp Feature: gene Location: 186398-186559 bp Feature: gene Location: 186726-187382 bp Feature: domain Description: GIIM Note: maturase Location: 186759-186981 bp Feature: domain Description: GIIM Note: maturase Location: 186759-186981 bp Feature: domain Description: HNH Note: nucleases Location: 187233-187368 bp Feature: domain Description: HNH Note: nucleases Location: 1872 33-187368 bp Feature: gene Location: 187430-188062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 187532-188036 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 187532 -188036 bp Feature: gene Location: 187853-188014 bp Feature: gene Location: 188055-189200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 188109-188418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 188109-188418 bp Feature: domain Description: GIIM Note: maturase Location: 188517-188751 bp Feature: domain Description: GIIM Note: maturase Location: 188517-188751 bp Feature: domain Description: McrA Location: 188805-189117 bp Feature: domain Description: McrA Location: 188805-189117 bp Feature: gene Location: 189249-190925 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 189531-190215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 189531-1902 15 bp Feature: domain Description: GIIM Note: maturase Location: 190284-190488 bp Feature: domain Description: GIIM Note: maturase Location: 1902 84-190488 bp Feature: domain Description: HNHc Note: nucleases Location: 190737-190887 bp Feature: domain Description: HNHc Note: nucleases Location: 190737-190887 bp Feature: gene Location: 190985-191161 bp Feature: gene Location: 191199-191336 bp Feature: gene Location: 191508-192233 bp Feature: RT Description: RVT_N Location: 191544-191790 bp Feature: RT Description: RVT_N Location: 191544-191790 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 191832-192207 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 191832 -192 2 07 bp Feature: gene Location: 192266-192568 bp Feature: gene Location: 192835-193338 bp Feature: RT Description: RVT_N Location: 192889-193135 bp Feature: RT Description: RVT_N Location: 192 889-193135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 193183-193321 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 193183-19332 1 bp Feature: gene Location: 193479-193865 bp Feature: gene Location: 194109-194762 bp Feature: domain Description: INT_Rci_Hp1_C Location: 194310-194670 bp Feature: domain Description: INT_Rci_Hp1_C Location: 194310-194670 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AraC_N (pfam06719), AraC (COG2207), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), McrA (COG4058), HNHc (smart00507), INT_Rci_Hp1_C (cd00796)