myRT

myRT report for GCA_000354335.2_ASM35433v2

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Seq: AQCY01000115.1 Escherichia coli BCE034_MS-14 gecBCE034MS14.contig.116, whole genome shotgun sequence (99187 bp)
Overview 1 RT 1: 3-8269 bp Neighborhood of RT #1 [3, 8280] Tra5 RVT-UG8 RVT-UG3 INT_Rci_Hp1_C INT_P4_C mutS1 Feature: gene Location: 3-380 bp Ori: EMV20647.1 Feature: domain Description: Tra5 Location: 6-375 bp Feature: domain Description: Tra5 Location: 6-375 bp Feature: gene Location: 819-2837 bp Ori: EMV20648.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1389-1839 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 389-1 839 bp Feature: gene Location: 2834-4096 bp Ori: EMV20649.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3116-3611 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 31 1 6-361 1 bp Feature: gene Location: 4093-5553 bp Ori: EMV20650.1 Feature: domain Description: INT_Rci_Hp1_C Location: 4468-4675 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 4468-4675 bp Feature: domain Description: INT_P4_C Location: 4894-5431 bp Feature: domain Description: INT_P4_C Location: 4894-5431 bp Feature: gene Location: 5713-8280 bp Ori: EMV20651.1 Gene: mutS Feature: domain Description: mutS1 Location: 5749-8269 bp Feature: domain Description: mutS1 Location: 5749-8269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-UG8, RVT-UG3, INT_Rci_Hp1_C (cd00796), INT_P4_C (cd00801), mutS1 (TIGR01070)

Seq: AQCY01000118.1 Escherichia coli BCE034_MS-14 gecBCE034MS14.contig.119, whole genome shotgun sequence (560 bp)
Overview 1 RT 1: 1-427 bp Neighborhood of RT #1 [1, 429] RVT-GII Feature: gene Location: 1-429 bp Ori: EMV20501.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109-427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109-42 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII