myRT

myRT report for GCA_000354855.1_ASM35485v1

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Seq: AQEU01000010.1 Escherichia coli MP021566.1 gecMP0215661.contig.9, whole genome shotgun sequence (7968 bp)
Overview 1 RT 1: 4598-7787 bp Neighborhood of RT #1 [4598, 7852] PRK13742 PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 4598-4867 bp Ori: EMX23754.1 Feature: domain Description: PRK13742 Location: 4601-4847 bp Feature: domain Description: PRK1 3742 Location: 4601 -4847 bp Feature: gene Location: 5157-5330 bp Ori: EMX23755.1 Feature: domain Description: PHA02517 Location: 5160-5328 bp Feature: domain Description: PHA0251 7 Location: 51 60-5328 bp Feature: gene Location: 5525-7033 bp Ori: EMX23756.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5783-6515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5783-651 5 bp Feature: domain Description: GIIM Note: maturase Location: 6590-6788 bp Feature: domain Description: GIIM Note: maturase Location: 6590-6788 bp Feature: gene Location: 7640-7852 bp Ori: EMX23757.1 Feature: domain Description: PHA02517 Location: 7643-7787 bp Feature: domain Description: PHA0251 7 Location: 7643-7787 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13742 (replication initiation protein RepE), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: AQEU01000001.1 Escherichia coli MP021566.1 gecMP0215661.contig.0, whole genome shotgun sequence (647170 bp)
Overview 1 RT 1: 329056-334647 bp Neighborhood of RT #1 [329056, 334647] PRK09692 RVT-UG5 nitrilase DDE_Tnp_IS1 Feature: gene Location: 329056-329184 bp Feature: gene Location: 329578-330834 bp Ori: EMX27239.1 Gene: int Feature: domain Description: PRK09692 Location: 329587-330790 bp Feature: domain Description: PRK09692 Location: 32 9587-330790 bp Feature: gene Location: 330927-333713 bp Ori: EMX27240.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 331401-331929 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 331401-33192 9 bp Feature: domain Description: nitrilase Location: 333141-333705 bp Feature: domain Description: nitrilase Location: 333141-333705 bp Feature: gene Location: 333724-334227 bp Ori: EMX27241.1 Feature: domain Description: DDE_Tnp_IS1 Location: 333835-334225 bp Feature: domain Description: DDE_Tnp_IS1 Location: 333835-3342 2 5 bp Feature: gene Location: 334483-334647 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-UG5, nitrilase (cl11424), DDE_Tnp_IS1 (pfam03400)

Seq: AQEU01000015.1 Escherichia coli MP021566.1 gecMP0215661.contig.14, whole genome shotgun sequence (698050 bp)
Overview 1 RT 1: 357455-361586 bp Neighborhood of RT #1 [357455, 361594] DDE_Tnp_1_5 PHA02517 RVT-GII PHA02517 Feature: gene Location: 357455-358378 bp Ori: EMX22832.1 Feature: domain Description: DDE_Tnp_1_5 Location: 357512-357845 bp Feature: domain Description: DDE_Tnp_1_5 Location: 3 57512-3 57845 bp Feature: gene Location: 358530-358922 bp Ori: EMX22833.1 Feature: domain Description: PHA02517 Location: 358566-358857 bp Feature: domain Description: PHA02517 Location: 3 58566-3 58857 bp Feature: gene Location: 359530-360678 bp Ori: EMX22834.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 359788-360520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 59788-3 60520 bp Feature: gene Location: 360690-361037 bp Feature: gene Location: 361214-361594 bp Ori: EMX22836.1 Feature: domain Description: PHA02517 Location: 361217-361586 bp Feature: domain Description: PHA02517 Location: 3 61217-3 61586 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_5 (pfam13737), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII

Seq: AQEU01000007.1 Escherichia coli MP021566.1 gecMP0215661.contig.6, whole genome shotgun sequence (27481 bp)
Overview 1 RT 1: 648-3209 bp Neighborhood of RT #1 [648, 3247] RVT-GII GIIM PHA02517 Transposase_20 Feature: gene Location: 648-2156 bp Ori: EMX25027.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 906-1638 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 906-1638 bp Feature: domain Description: GIIM Note: maturase Location: 1713-1911 bp Feature: domain Description: GIIM Note: maturase Location: 1713-1911 bp Feature: gene Location: 2348-2719 bp Ori: EMX25028.1 Feature: domain Description: PHA02517 Location: 2351-2717 bp Feature: domain Description: PHA02517 Location: 2351-2717 bp Feature: gene Location: 2876-3247 bp Ori: EMX25029.1 Feature: domain Description: Transposase_20 Location: 3095-3209 bp Feature: domain Description: Transposase_20 Location: 3095-3209 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), Transposase_20 (pfam02371)

Seq: AQEU01000008.1 Escherichia coli MP021566.1 gecMP0215661.contig.7, whole genome shotgun sequence (348356 bp)
Overview 1 RT 1: 344788-348329 bp Neighborhood of RT #1 [344788, 348356] InsE PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 344788-345114 bp Ori: EMX24997.1 Feature: domain Description: InsE Location: 344800-345064 bp Feature: domain Description: InsE Location: 344800-345 064 bp Feature: gene Location: 345120-345539 bp Ori: EMX24998.1 Feature: domain Description: PHA02517 Location: 345135-345474 bp Feature: domain Description: PHA025 17 Location: 345 135 -345 474 bp Feature: gene Location: 346146-347654 bp Ori: EMX24999.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 346404-347136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 346404-347136 bp Feature: domain Description: GIIM Note: maturase Location: 347211-347409 bp Feature: domain Description: GIIM Note: maturase Location: 347211-347409 bp Feature: gene Location: 347777-348052 bp Ori: EMX25000.1 Feature: domain Description: PHA02517 Location: 347780-348050 bp Feature: domain Description: PHA025 17 Location: 347780-34805 0 bp Feature: gene Location: 348134-348356 bp Ori: EMX25001.1 Feature: domain Description: InsE Location: 348149-348329 bp Feature: domain Description: InsE Location: 348149-348329 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: AQEU01000025.1 Escherichia coli MP021566.1 gecMP0215661.contig.24, whole genome shotgun sequence (8763 bp)
Overview 1 RT 1: 273-3704 bp Neighborhood of RT #1 [273, 3706] PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 273-644 bp Ori: EMX19212.1 Feature: domain Description: PHA02517 Location: 276-642 bp Feature: domain Description: PHA02517 Location: 276 -6 42 bp Feature: gene Location: 837-2345 bp Ori: EMX19213.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1095-1827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1095-1827 bp Feature: domain Description: GIIM Note: maturase Location: 1902-2100 bp Feature: domain Description: GIIM Note: maturase Location: 1902-2100 bp Feature: gene Location: 2952-3431 bp Ori: EMX19214.1 Feature: domain Description: PHA02517 Location: 3012-3366 bp Feature: domain Description: PHA02517 Location: 3012-336 6 bp Feature: gene Location: 3431-3706 bp Ori: EMX19215.1 Feature: domain Description: InsE Location: 3452-3704 bp Feature: domain Description: InsE Location: 3452-3704 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)