myRT

myRT report for GCA_000355215.2_ASM35521v2

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Seq: AQFC01000062.1 Escherichia coli Envira 8/11 gecEnvira8.contig.61, whole genome shotgun sequence (27013 bp)
Overview 1 RT 1: 18603-26955 bp Neighborhood of RT #1 [18603, 26963] HTH_23 InsE Peptidase_S6 autotrans_barl RVT-GII GIIM DDE_Tnp_IS66_C DDE_Tnp_IS66 Feature: gene Location: 18603-19280 bp Feature: domain Description: HTH_23 Location: 18663-18774 bp Feature: domain Description: HTH_23 Location: 1 8663-1 8774 bp Feature: domain Description: InsE Location: 18906-19257 bp Feature: domain Description: InsE Location: 1 8906-1 9257 bp Feature: gene Location: 19528-23622 bp Feature: domain Description: Peptidase_S6 Location: 19681-21865 bp Feature: domain Description: Peptidase_S6 Location: 1 9681 -21 865 bp Feature: domain Description: autotrans_barl Location: 22399-23620 bp Feature: domain Description: autotrans_barl Location: 22399-23620 bp Feature: gene Location: 24421-25752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24706-25393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24706-25393 bp Feature: domain Description: GIIM Note: maturase Location: 25510-25678 bp Feature: domain Description: GIIM Note: maturase Location: 2551 0-25678 bp Feature: gene Location: 26458-26667 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 26533-26644 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 26533-26644 bp Feature: gene Location: 26667-26963 bp Feature: domain Description: DDE_Tnp_IS66 Location: 26679-26955 bp Feature: domain Description: DDE_Tnp_IS66 Location: 26679-26955 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_23 (pfam13384), InsE (COG2963), Peptidase_S6 (pfam02395), autotrans_barl (TIGR01414), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), DDE_Tnp_IS66 (pfam03050)

Seq: AQFC01000025.1 Escherichia coli Envira 8/11 gecEnvira8.contig.24, whole genome shotgun sequence (27218 bp)
Overview 1 RT 1: 23531-26822 bp Neighborhood of RT #1 [23531, 26980] Ogr_Delta D RVT-GII GIIM DDE_Tnp_Tn3 rve_3 Feature: gene Location: 23531-23791 bp Feature: domain Description: Ogr_Delta Location: 23540-23681 bp Feature: domain Description: Ogr_Delta Location: 2 3540-2 3681 bp Feature: gene Location: 23834-24205 bp Feature: domain Description: D Location: 23864-24179 bp Feature: domain Description: D Location: 2 3864-2 4179 bp Feature: gene Location: 24342-25673 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24627-25314 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 462 7-2 5314 bp Feature: domain Description: GIIM Note: maturase Location: 25431-25599 bp Feature: domain Description: GIIM Note: maturase Location: 2 5431-2 5599 bp Feature: gene Location: 26176-26367 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 26179-26287 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 2 6179-2 62 87 bp Feature: gene Location: 26681-26980 bp Feature: domain Description: rve_3 Location: 26741-26822 bp Feature: domain Description: rve_3 Location: 2 6741-2 682 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ogr_Delta (pfam04606), D (PHA02561), RVT-GII, GIIM (pfam08388), DDE_Tnp_Tn3 (pfam01526), rve_3 (pfam13683)

Seq: AQFC01000060.1 Escherichia coli Envira 8/11 gecEnvira8.contig.59, whole genome shotgun sequence (2249 bp)
Overview 1 RT 1: 85-1903 bp Neighborhood of RT #1 [85, 1903] RVT-GII GIIM Feature: gene Location: 85-1593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 343-1075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 43 -1075 bp Feature: domain Description: GIIM Note: maturase Location: 1150-1348 bp Feature: domain Description: GIIM Note: maturase Location: 1150-13 48 bp Feature: gene Location: 1790-1903 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)