myRT

myRT report for GCA_000356245.1_ASM35624v1

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Seq: APXK01000262.1 Escherichia coli 2875150 gec2875150.contig.261, whole genome shotgun sequence (24044 bp)
Overview 1 RT 1: 4680-7743 bp Neighborhood of RT #1 [4680, 7743] PRK09183 PHA02517 RVT-GII GIIM Feature: gene Location: 4680-5477 bp Ori: ENB05788.1 Feature: domain Description: PRK09183 Location: 4692-5427 bp Feature: domain Description: PRK091 83 Location: 4692-5427 bp Feature: gene Location: 5488-5733 bp Ori: ENB05789.1 Feature: domain Description: PHA02517 Location: 5491-5686 bp Feature: domain Description: PHA0251 7 Location: 5491 -5686 bp Feature: gene Location: 5925-7433 bp Ori: ENB05790.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6183-6915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 83-691 5 bp Feature: domain Description: GIIM Note: maturase Location: 6990-7188 bp Feature: domain Description: GIIM Note: maturase Location: 6990-71 88 bp Feature: gene Location: 7472-7594 bp Feature: gene Location: 7630-7743 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09183 (transposase/IS protein; Provisional), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: APXK01000005.1 Escherichia coli 2875150 gec2875150.contig.4, whole genome shotgun sequence (2827 bp)
Overview 1 RT 1: 1-2827 bp Neighborhood of RT #1 [1, 2827] DDE_Tnp_IS1 RVT-UG17 Feature: gene Location: 1-444 bp Ori: ENB18635.1 Feature: domain Description: DDE_Tnp_IS1 Location: 52-442 bp Feature: domain Description: DDE_Tnp_IS1 Location: 52 -442 bp Feature: gene Location: 847-2217 bp Ori: ENB18636.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1075-1681 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1075-1681 bp Feature: gene Location: 2325-2612 bp Feature: gene Location: 2638-2827 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), RVT-UG17