myRT

myRT report for GCA_000356465.2_ASM35646v2

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Seq: APXH01000012.1 Escherichia coli 2862600 gec2862600.contig.15, whole genome shotgun sequence (3562 bp)
Overview 1 RT 1: 1-3014 bp Neighborhood of RT #1 [1, 3014] PRK13889 RVT-Retrons Feature: gene Location: 1-1257 bp Ori: ENB03752.1 Feature: domain Description: PRK13889 Location: 7-337 bp Feature: domain Description: PRK1 3889 Location: 7-337 bp Feature: gene Location: 1334-2434 bp Ori: ENB03753.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1475-2027 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 475-2027 bp Feature: gene Location: 2799-3014 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13889 (conjugal transfer relaxase TraA; Provisional), RVT-Retrons

Seq: APXH01000159.1 Escherichia coli 2862600 gec2862600.contig.169, whole genome shotgun sequence (52118 bp)
Overview 1 RT 1: 98-3728 bp Neighborhood of RT #1 [98, 3910] Peptidase_S74 RVT-UG17 HTH_XRE Feature: gene Location: 98-688 bp Ori: ENA88690.1 Feature: domain Description: Peptidase_S74 Location: 332-491 bp Feature: domain Description: Peptidase_S74 Location: 332 -491 bp Feature: gene Location: 699-986 bp Feature: gene Location: 1165-2463 bp Ori: ENA88692.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1393-1999 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1393-1999 bp Feature: gene Location: 2951-3067 bp Feature: gene Location: 3629-3910 bp Ori: ENA88694.1 Feature: domain Description: HTH_XRE Location: 3632-3728 bp Feature: domain Description: HTH_XRE Location: 3632 -372 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_S74 (pfam13884), RVT-UG17, HTH_XRE (smart00530)