myRT

myRT report for GCA_000357005.2_ASM35700v2

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Seq: APYC01000043.1 Escherichia coli P0299438.3 gecP02994383.contig.42, whole genome shotgun sequence (9011 bp)
Overview 1 RT 1: 3-3639 bp Neighborhood of RT #1 [3, 3791] Tra5 RVT-GII StbA Plasmid_stab_B Feature: gene Location: 3-422 bp Ori: ENB98201.1 Feature: domain Description: Tra5 Location: 6-417 bp Feature: domain Description: Tra5 Location: 6-41 7 bp Feature: gene Location: 908-1141 bp Ori: ENB98198.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 1 -1 1 00 bp Feature: gene Location: 2437-3396 bp Ori: ENB98195.1 Feature: domain Description: StbA Location: 2443-3391 bp Feature: domain Description: StbA Location: 2443-3391 bp Feature: gene Location: 3396-3791 bp Ori: ENB98197.1 Feature: domain Description: Plasmid_stab_B Location: 3426-3639 bp Feature: domain Description: Plasmid_stab_B Location: 3426-3639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: APYC01000035.1 Escherichia coli P0299438.3 gecP02994383.contig.34, whole genome shotgun sequence (464239 bp)
Overview 1 RT 1: 244175-253686 bp Neighborhood of RT #1 [244175, 254618] LprI RVT-UG7 FRG SR_Res_par HTH_38 RVT-Retrons DUF4236 Feature: gene Location: 244175-245005 bp Ori: ENB99326.1 Feature: domain Description: LprI Location: 244796-244991 bp Feature: domain Description: LprI Location: 2 44796-2 44991 bp Feature: gene Location: 245157-245342 bp Feature: gene Location: 245755-247269 bp Ori: ENB99420.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 246127-246550 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 2 4612 7-2 46550 bp Feature: gene Location: 247431-248255 bp Ori: ENB99499.1 Feature: domain Description: FRG Location: 247539-247833 bp Feature: domain Description: FRG Location: 2 47539-2 47833 bp Feature: gene Location: 248575-249186 bp Ori: ENB99307.1 Feature: domain Description: SR_Res_par Location: 248590-249022 bp Feature: domain Description: SR_Res_par Location: 2 48590-2 4902 2 bp Feature: domain Description: HTH_38 Location: 249085-249178 bp Feature: domain Description: HTH_38 Location: 2 49085-2 49178 bp Feature: gene Location: 249715-251112 bp Feature: gene Location: 251209-252159 bp Ori: ENB99227.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 251389-251920 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 51389-2 5192 0 bp Feature: gene Location: 252483-252638 bp Feature: gene Location: 253527-254618 bp Ori: ENB99536.1 Feature: domain Description: DUF4236 Location: 253542-253686 bp Feature: domain Description: DUF42 36 Location: 2 53542 -2 53686 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LprI (pfam07007), RVT-UG7, FRG (smart00901), SR_Res_par (cd03767), HTH_38 (pfam13936), RVT-Retrons, DUF4236 (pfam14020)