myRT

myRT report for GCA_000357145.2_ASM35714v2

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Seq: APYJ01000110.1 Escherichia coli P02997067.6 gecP029970676.contig.109, whole genome shotgun sequence (2359 bp)
Overview 1 RT 1: 943-2288 bp Neighborhood of RT #1 [943, 2323] RVT-GII GIIM HNHc Feature: gene Location: 943-1134 bp Feature: gene Location: 1205-1321 bp Feature: gene Location: 1412-2323 bp Ori: ENC39469.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1439-1634 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 439-1 634 bp Feature: domain Description: GIIM Note: maturase Location: 1685-1919 bp Feature: domain Description: GIIM Note: maturase Location: 1 685-1 91 9 bp Feature: domain Description: HNHc Note: nucleases Location: 2129-2288 bp Feature: domain Description: HNHc Note: nucleases Location: 21 29-2288 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: APYJ01000125.1 Escherichia coli P02997067.6 gecP029970676.contig.124, whole genome shotgun sequence (22309 bp)
Overview 1 RT 1: 1-3761 bp Neighborhood of RT #1 [1, 3781] RVT-UG8 RVT-UG3 PRK09678 Psu Feature: gene Location: 1-1289 bp Ori: ENC38415.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 574-1027 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 574-102 7 bp Feature: gene Location: 1280-2557 bp Ori: ENC38416.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1568-2063 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1568-2 063 bp Feature: gene Location: 2952-3224 bp Ori: ENC38417.1 Feature: domain Description: PRK09678 Location: 2961-3126 bp Feature: domain Description: PRK09678 Location: 2 961-312 6 bp Feature: gene Location: 3230-3781 bp Ori: ENC38418.1 Feature: domain Description: Psu Location: 3251-3761 bp Feature: domain Description: Psu Location: 32 51-3761 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, RVT-UG3, PRK09678 (DNA-binding transcriptional regulator; Provisional), Psu (pfam07455)

Seq: APYJ01000077.1 Escherichia coli P02997067.6 gecP029970676.contig.76, whole genome shotgun sequence (4293 bp)
Overview 1 RT 1: 1904-4290 bp Neighborhood of RT #1 [1904, 4293] RVT_N RVT-GII Feature: gene Location: 1904-2170 bp Feature: gene Location: 2264-2698 bp Feature: gene Location: 3849-4293 bp Ori: ENC41053.1 Feature: domain Description: RVT_N Location: 3897-4134 bp Feature: domain Description: RVT_N Location: 3 897-413 4 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4185-4290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4185-4290 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII