myRT

myRT report for GCA_000357445.2_ASM35744v2

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Seq: APZO01000141.1 Escherichia coli P0298942.3 gecP02989423.contig.140, whole genome shotgun sequence (57218 bp)
Overview 1 RT 1: 5134-8878 bp Neighborhood of RT #1 [5134, 9060] DUF4094 Peptidase_S74 RVT-UG17 HTH_XRE Feature: gene Location: 5134-5823 bp Ori: END61223.1 Feature: domain Description: DUF4094 Location: 5176-5266 bp Feature: domain Description: DUF4094 Location: 51 76-5266 bp Feature: domain Description: Peptidase_S74 Location: 5482-5641 bp Feature: domain Description: Peptidase_S74 Location: 5482-5641 bp Feature: gene Location: 5849-6136 bp Feature: gene Location: 6315-7613 bp Ori: END61257.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 6543-7149 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 6543-71 49 bp Feature: gene Location: 8101-8217 bp Feature: gene Location: 8767-9060 bp Ori: END61220.1 Feature: domain Description: HTH_XRE Location: 8773-8878 bp Feature: domain Description: HTH_XRE Location: 8773-8878 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4094 (pfam13334), Peptidase_S74 (pfam13884), RVT-UG17, HTH_XRE (smart00530)

Seq: APZO01000057.1 Escherichia coli P0298942.3 gecP02989423.contig.56, whole genome shotgun sequence (83633 bp)
Overview 1 RT 1: 45991-51283 bp Neighborhood of RT #1 [45991, 51283] PRK13889 RVT-Retrons Feature: gene Location: 45991-46113 bp Feature: gene Location: 46733-48235 bp Ori: END70361.1 Feature: domain Description: PRK13889 Location: 46736-47315 bp Feature: domain Description: PRK13889 Location: 46736-47315 bp Feature: gene Location: 48312-49412 bp Ori: END70377.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 48453-49005 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 48453-49005 bp Feature: gene Location: 49777-49923 bp Feature: gene Location: 50732-51283 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13889 (conjugal transfer relaxase TraA; Provisional), RVT-Retrons