myRT

myRT report for GCA_000358555.1_ASM35855v1

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Seq: AQBT01000128.1 Escherichia coli p0305293.10 gecp030529310.contig.128, whole genome shotgun sequence (20152 bp)
Overview 1 RT 1: 425-2458 bp Neighborhood of RT #1 [425, 2568] RVT-GII GIIM D Ogr_Delta Feature: gene Location: 425-1756 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 710-1397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 0-1 397 bp Feature: domain Description: GIIM Note: maturase Location: 1514-1682 bp Feature: domain Description: GIIM Note: maturase Location: 1 51 4-1 682 bp Feature: gene Location: 1894-2265 bp Feature: domain Description: D Location: 1924-2239 bp Feature: domain Description: D Location: 1 924-2239 bp Feature: gene Location: 2308-2568 bp Feature: domain Description: Ogr_Delta Location: 2317-2458 bp Feature: domain Description: Ogr_Delta Location: 231 7-2458 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT D (PHA02561), Ogr_Delta (pfam04606), RVT-GII, GIIM (pfam08388)

Seq: AQBT01000066.1 Escherichia coli p0305293.10 gecp030529310.contig.66, whole genome shotgun sequence (4155 bp)
Overview 1 RT 1: 1056-3192 bp Neighborhood of RT #1 [1056, 3227] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 1056-1247 bp Feature: gene Location: 1261-1416 bp Feature: gene Location: 1560-3227 bp Feature: RT Description: RVT_N Location: 1608-1845 bp Feature: RT Description: RVT_N Location: 1608-1845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1896-2538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1896-2 538 bp Feature: domain Description: GIIM Note: maturase Location: 2589-2823 bp Feature: domain Description: GIIM Note: maturase Location: 2 589-2 82 3 bp Feature: domain Description: HNHc Note: nucleases Location: 3033-3192 bp Feature: domain Description: HNHc Note: nucleases Location: 3033-3192 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: AQBT01000021.1 Escherichia coli p0305293.10 gecp030529310.contig.20, whole genome shotgun sequence (2907 bp)
Overview 1 RT 1: 222-2774 bp Neighborhood of RT #1 [222, 2848] rve_3 DDE_Tnp_Tn3 RVT-GII GIIM Feature: gene Location: 222-509 bp Feature: domain Description: rve_3 Location: 270-351 bp Feature: domain Description: rve_3 Location: 270-3 51 bp Feature: gene Location: 823-1014 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 826-934 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 826-93 4 bp Feature: gene Location: 1517-2848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1802-2489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1802-2489 bp Feature: domain Description: GIIM Note: maturase Location: 2606-2774 bp Feature: domain Description: GIIM Note: maturase Location: 2606-2774 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), rve_3 (pfam13683), DDE_Tnp_Tn3 (pfam01526)

Seq: AQBT01000137.1 Escherichia coli p0305293.10 gecp030529310.contig.137, whole genome shotgun sequence (18608 bp)
Overview 1 RT 1: 1-3224 bp Neighborhood of RT #1 [1, 3289] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 1-238 bp Feature: gene Location: 282-632 bp Feature: domain Description: PHA02517 Location: 285-606 bp Feature: domain Description: PHA02517 Location: 285-606 bp Feature: gene Location: 755-2263 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1013-1745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1013-174 5 bp Feature: domain Description: GIIM Note: maturase Location: 1820-2018 bp Feature: domain Description: GIIM Note: maturase Location: 1820-2018 bp Feature: gene Location: 2460-2573 bp Feature: gene Location: 2870-3289 bp Feature: domain Description: PHA02517 Location: 2885-3224 bp Feature: domain Description: PHA02517 Location: 2885-3224 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: AQBT01000006.1 Escherichia coli p0305293.10 gecp030529310.contig.5, whole genome shotgun sequence (7155 bp)
Overview 1 RT 1: 425-6935 bp Neighborhood of RT #1 [425, 6935] RVT-GII GIIM Peptidase_S6 autotrans_barl Feature: gene Location: 425-1756 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 710-1397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 710-1397 bp Feature: domain Description: GIIM Note: maturase Location: 1514-1682 bp Feature: domain Description: GIIM Note: maturase Location: 15 14-1682 bp Feature: gene Location: 2555-6649 bp Feature: domain Description: Peptidase_S6 Location: 2708-4892 bp Feature: domain Description: Peptidase_S6 Location: 2708-4892 bp Feature: domain Description: autotrans_barl Location: 5426-6647 bp Feature: domain Description: autotrans_barl Location: 5 426-6647 bp Feature: gene Location: 6819-6935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_S6 (pfam02395), autotrans_barl (TIGR01414), RVT-GII, GIIM (pfam08388)