myRT

myRT report for GCA_000358675.2_ASM35867v2

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Seq: AQBZ01000167.1 Escherichia coli p0305293.4 gecp03052934.contig.166, whole genome shotgun sequence (18681 bp)
Overview 1 RT 1: 30-3201 bp Neighborhood of RT #1 [30, 3266] PRK09183 PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 30-215 bp Feature: domain Description: PRK09183 Location: 33-213 bp Feature: domain Description: PRK091 83 Location: 33-21 3 bp Feature: gene Location: 259-609 bp Feature: domain Description: PHA02517 Location: 262-583 bp Feature: domain Description: PHA0251 7 Location: 262-583 bp Feature: gene Location: 732-2240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 990-1722 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 990-1 722 bp Feature: domain Description: GIIM Note: maturase Location: 1797-1995 bp Feature: domain Description: GIIM Note: maturase Location: 1 797-1 995 bp Feature: gene Location: 2437-2550 bp Feature: gene Location: 2847-3266 bp Feature: domain Description: PHA02517 Location: 2862-3201 bp Feature: domain Description: PHA0251 7 Location: 2862-3201 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), PRK09183 (transposase/IS protein; Provisional), RVT-GII, GIIM (pfam08388)

Seq: AQBZ01000096.1 Escherichia coli p0305293.4 gecp03052934.contig.95, whole genome shotgun sequence (4488 bp)
Overview 1 RT 1: 1321-4375 bp Neighborhood of RT #1 [1321, 4375] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 1321-1512 bp Feature: gene Location: 1526-1681 bp Feature: gene Location: 1825-3492 bp Feature: RT Description: RVT_N Location: 1873-2110 bp Feature: RT Description: RVT_N Location: 1873-2 110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2161-2803 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 161-2 803 bp Feature: domain Description: GIIM Note: maturase Location: 2854-3088 bp Feature: domain Description: GIIM Note: maturase Location: 2 854-3088 bp Feature: domain Description: HNHc Note: nucleases Location: 3298-3457 bp Feature: domain Description: HNHc Note: nucleases Location: 32 98-3457 bp Feature: gene Location: 4127-4375 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: AQBZ01000104.1 Escherichia coli p0305293.4 gecp03052934.contig.103, whole genome shotgun sequence (15107 bp)
Overview 1 RT 1: 12916-14985 bp Neighborhood of RT #1 [12916, 15059] Ogr_Delta D RVT-GII GIIM Feature: gene Location: 12916-13176 bp Feature: domain Description: Ogr_Delta Location: 12925-13066 bp Feature: domain Description: Ogr_Delta Location: 12925-13 066 bp Feature: gene Location: 13219-13590 bp Feature: domain Description: D Location: 13249-13564 bp Feature: domain Description: D Location: 13 249-13 564 bp Feature: gene Location: 13728-15059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14013-14700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14013 -14700 bp Feature: domain Description: GIIM Note: maturase Location: 14817-14985 bp Feature: domain Description: GIIM Note: maturase Location: 14817-14985 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ogr_Delta (pfam04606), D (PHA02561), RVT-GII, GIIM (pfam08388)