myRT

myRT report for GCA_000358995.1_ASM35899v1

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Seq: AQAX01000085.1 Escherichia coli P0304816.14 gecP030481614.contig.84, whole genome shotgun sequence (97413 bp)
Overview 1 RT 1: 42886-53808 bp Neighborhood of RT #1 [42886, 53825] RVT-Retrons HTH_XRE DUF4062 PRK09692 RVT-UG7 Psu Feature: gene Location: 42886-43230 bp Feature: gene Location: 43611-44381 bp Feature: gene Location: 44443-46152 bp Ori: ENF39119.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 44596-45193 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 44596-451 93 bp Feature: gene Location: 46289-46786 bp Feature: gene Location: 47026-47487 bp Ori: ENF39121.1 Gene: ahdIC Feature: domain Description: HTH_XRE Location: 47056-47224 bp Feature: domain Description: HTH_XRE Location: 47056-47224 bp Feature: gene Location: 47518-48699 bp Ori: ENF39122.1 Feature: domain Description: DUF4062 Location: 47533-47860 bp Feature: domain Description: DUF4062 Location: 47533-47860 bp Feature: gene Location: 49408-50592 bp Ori: ENF39123.1 Feature: domain Description: PRK09692 Location: 49414-50569 bp Feature: domain Description: PRK09692 Location: 4941 4-50569 bp Feature: gene Location: 50585-52213 bp Ori: ENF39124.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 50993-51422 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 50993-51 422 bp Feature: gene Location: 52210-52950 bp Feature: gene Location: 53253-53825 bp Ori: ENF39126.1 Feature: domain Description: Psu Location: 53271-53808 bp Feature: domain Description: Psu Location: 53271 -53808 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, HTH_XRE (smart00530), DUF4062 (pfam13271), PRK09692 (Integrase; provisional), RVT-UG7, Psu (pfam07455)

Seq: AQAX01000003.1 Escherichia coli P0304816.14 gecP030481614.contig.2, whole genome shotgun sequence (1699 bp)
Overview 1 RT 1: 376-1664 bp Neighborhood of RT #1 [376, 1699] RVT-GII GIIM HNHc Feature: gene Location: 376-567 bp Feature: gene Location: 638-772 bp Feature: gene Location: 845-1699 bp Ori: ENF44389.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 848-1010 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 848-1010 bp Feature: domain Description: GIIM Note: maturase Location: 1061-1295 bp Feature: domain Description: GIIM Note: maturase Location: 1061-12 95 bp Feature: domain Description: HNHc Note: nucleases Location: 1505-1664 bp Feature: domain Description: HNHc Note: nucleases Location: 1505-1664 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507)