myRT

myRT report for GCA_000359565.1_PA45

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Seq: APMD01000088.1 Pseudomonas aeruginosa PA45 contig00088, whole genome shotgun sequence (302463 bp)
Overview 1 RT 1: 220597-230650 bp Neighborhood of RT #1 [220597, 230652] COG3177 RVT-GII Intron_maturas2 HNHc PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Feature: gene Location: 220597-221718 bp Feature: domain Description: COG3177 Location: 220615-221707 bp Feature: domain Description: COG31 77 Location: 22061 5-221 707 bp Feature: gene Location: 221977-222114 bp Feature: gene Location: 222410-224260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 222677-223499 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 222677-223499 bp Feature: domain Description: Intron_maturas2 Location: 223589-223970 bp Feature: domain Description: Intron_maturas2 Location: 223589-223970 bp Feature: domain Description: HNHc Note: nucleases Location: 224009-224198 bp Feature: domain Description: HNHc Note: nucleases Location: 224009-2241 98 bp Feature: gene Location: 224955-228692 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 225063-225720 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 225063-225720 bp Feature: domain Description: PRK09776 Location: 225933-226404 bp Feature: domain Description: PRK09776 Location: 225933-226404 bp Feature: domain Description: PAS Location: 226494-226986 bp Feature: domain Description: PAS Location: 226494-226986 bp Feature: domain Description: PRK10060 Location: 226995-228642 bp Feature: domain Description: PRK1 0060 Location: 226995-228642 bp Feature: gene Location: 228799-230652 bp Feature: domain Description: PRK05658 Location: 228811-230650 bp Feature: domain Description: PRK05658 Location: 22881 1 -230650 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3177 (Fic family protein ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)