myRT

myRT report for GCA_000364165.1_Clos_bact_ASF356_V1

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Seq: KB822566.1 Clostridium sp. ASF356 genomic scaffold acMac-supercont1.2, whole genome shotgun sequence (1039841 bp)
Overview 1 RT 1: 670455-679212 bp 2 RT 2: 860677-865343 bp Neighborhood of RT #1 [670455, 679274] RVT-Retrons KOG1287 MNHE Neighborhood of RT #2 [860677, 865366] MobC KOG1000 RVT-GII Intron_maturas2 HNHc HTH_16 RpoE Feature: gene Location: 670455-673205 bp Feature: gene Location: 673211-674977 bp Feature: gene Location: 674977-676443 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 675589-676213 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 675589-67621 3 bp Feature: gene Location: 676958-678379 bp Feature: domain Description: KOG1287 Location: 676970-678368 bp Feature: domain Description: KOG1 287 Location: 676970-678368 bp Feature: gene Location: 678792-679274 bp Feature: domain Description: MNHE Location: 678801-679212 bp Feature: domain Description: MNHE Location: 678801 -67921 2 bp Feature: gene Location: 860677-861000 bp Feature: domain Description: MobC Location: 860857-860983 bp Feature: domain Description: MobC Location: 860857-860983 bp Feature: gene Location: 861000-862031 bp Feature: domain Description: KOG1000 Location: 861048-861282 bp Feature: domain Description: KOG1 000 Location: 861 048-861 282 bp Feature: gene Location: 862092-863909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 862356-863181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 862356-8631 81 bp Feature: domain Description: Intron_maturas2 Location: 863325-863607 bp Feature: domain Description: Intron_maturas2 Location: 863325-863607 bp Feature: domain Description: HNHc Note: nucleases Location: 863733-863880 bp Feature: domain Description: HNHc Note: nucleases Location: 863733-863880 bp Feature: gene Location: 864733-864936 bp Feature: domain Description: HTH_16 Location: 864760-864925 bp Feature: domain Description: HTH_1 6 Location: 864760-864925 bp Feature: gene Location: 864908-865366 bp Feature: domain Description: RpoE Location: 864950-865343 bp Feature: domain Description: RpoE Location: 864950-865343 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, KOG1287 (KOG1287, Amino acid transporters ), MNHE (pfam01899), MobC (pfam05713), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), HTH_16 (pfam12645), RpoE (COG3343)