myRT

myRT report for GCA_000365425.1_ASM36542v1

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Seq: AQOV01000001.1 Methylomonas sp. MK1 G006DRAFT_scaffold00001.1_C, whole genome shotgun sequence (3535778 bp)
Overview 1 RT 1: 192067-196298 bp 2 RT 2: 644327-647960 bp 3 RT 3: 796823-802147 bp 4 RT 4: 1929812-1934190 bp 5 RT 5: 3223339-3230003 bp Neighborhood of RT #1 [192067, 196298] BchE RVT-GII Neighborhood of RT #2 [644327, 648082] Tautomerase_2 TPMT RVT-GII GIIM VOC_like Transgly Neighborhood of RT #3 [796823, 802317] HATPase_c_3 RVT_N RVT-GII GIIM HNH DUF4372 DDE_Tnp_1 Neighborhood of RT #4 [1929812, 1934190] HATPase_PhoQ-like RVT_N RVT-GII GIIM HNH Neighborhood of RT #5 [3223339, 3231106] Aldo_ket_red RVT-GII TPR TPR Feature: gene Location: 192067-193605 bp Feature: domain Description: BchE Location: 192073-193510 bp Feature: domain Description: BchE Location: 1 92073-1 9351 0 bp Feature: gene Location: 193791-194018 bp Feature: gene Location: 194059-195441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 194467-195157 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 94467-1 951 57 bp Feature: gene Location: 195757-196059 bp Feature: gene Location: 196125-196298 bp Feature: gene Location: 644327-644722 bp Feature: domain Description: Tautomerase_2 Location: 644450-644669 bp Feature: domain Description: Tautomerase_2 Location: 644450-644669 bp Feature: gene Location: 645204-645872 bp Feature: domain Description: TPMT Location: 645318-645792 bp Feature: domain Description: TPMT Location: 64531 8-645792 bp Feature: gene Location: 645948-647033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 645957-646575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 645957-646575 bp Feature: domain Description: GIIM Note: maturase Location: 646620-646827 bp Feature: domain Description: GIIM Note: maturase Location: 646620-646827 bp Feature: gene Location: 647048-647296 bp Feature: domain Description: VOC_like Location: 647105-647258 bp Feature: domain Description: VOC_like Location: 6471 05-647258 bp Feature: gene Location: 647360-648082 bp Feature: domain Description: Transgly Location: 647510-647960 bp Feature: domain Description: Transgly Location: 64751 0-647960 bp Feature: gene Location: 796823-797128 bp Feature: domain Description: HATPase_c_3 Location: 796910-797030 bp Feature: domain Description: HATPase_c_3 Location: 79691 0-797030 bp Feature: gene Location: 797403-797558 bp Feature: gene Location: 797726-799414 bp Feature: domain Description: RVT_N Location: 797777-798020 bp Feature: domain Description: RVT_N Location: 797777-798020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 798065-798728 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 798065-798728 bp Feature: domain Description: GIIM Note: maturase Location: 798779-799013 bp Feature: domain Description: GIIM Note: maturase Location: 798779-79901 3 bp Feature: domain Description: HNH Note: nucleases Location: 799265-799382 bp Feature: domain Description: HNH Note: nucleases Location: 799265-799382 bp Feature: gene Location: 799686-800900 bp Feature: gene Location: 801148-802317 bp Feature: domain Description: DUF4372 Location: 801160-801376 bp Feature: domain Description: DUF4372 Location: 801 1 60-801 376 bp Feature: domain Description: DDE_Tnp_1 Location: 801517-802147 bp Feature: domain Description: DDE_Tnp_1 Location: 801 51 7-8021 47 bp Feature: gene Location: 1929812-1930117 bp Feature: domain Description: HATPase_PhoQ-like Location: 1929890-1930112 bp Feature: domain Description: HATPase_PhoQ-like Location: 1 929890-1 9301 1 2 bp Feature: gene Location: 1930392-1930547 bp Feature: gene Location: 1930715-1932403 bp Feature: domain Description: RVT_N Location: 1930766-1931009 bp Feature: domain Description: RVT_N Location: 1 930766-1 931 009 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1931054-1931717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 931 054-1 931 71 7 bp Feature: domain Description: GIIM Note: maturase Location: 1931768-1932002 bp Feature: domain Description: GIIM Note: maturase Location: 1 931 768-1 932002 bp Feature: domain Description: HNH Note: nucleases Location: 1932254-1932371 bp Feature: domain Description: HNH Note: nucleases Location: 1 932254-1 932371 bp Feature: gene Location: 1932601-1933884 bp Feature: gene Location: 1933996-1934190 bp Feature: gene Location: 3223339-3224187 bp Feature: domain Description: Aldo_ket_red Location: 3223363-3224179 bp Feature: domain Description: Aldo_ket_red Location: 3223363-32241 79 bp Feature: gene Location: 3224590-3226161 bp Feature: gene Location: 3227018-3228190 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3227141-3227831 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32271 41 -3227831 bp Feature: gene Location: 3228424-3228591 bp Feature: gene Location: 3228617-3231106 bp Feature: domain Description: TPR Location: 3228680-3228851 bp Feature: domain Description: TPR Location: 3228680-3228851 bp Feature: domain Description: TPR Location: 3229847-3230003 bp Feature: domain Description: TPR Location: 3229847-3230003 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BchE (TIGR02026), RVT-GII, Tautomerase_2 (pfam14552), TPMT (pfam05724), GIIM (pfam08388), VOC_like (cd16355), Transgly (pfam00912), HATPase_c_3 (pfam13589), RVT_N (pfam13655), HNH (pfam01844)
DUF4372 (pfam14294), DDE_Tnp_1 (pfam01609), HATPase_PhoQ-like (cd16954), Aldo_ket_red (pfam00248), TPR (smart00028)

Seq: AQOV01000002.1 Methylomonas sp. MK1 G006DRAFT_scaffold00002.2_C, whole genome shotgun sequence (1544187 bp)
Overview 1 RT 1: 867035-871008 bp Neighborhood of RT #1 [867035, 871145] RVT-GII RVT-GII GIIM COG3666 IstB_IS21 Feature: gene Location: 867035-867277 bp Feature: gene Location: 867527-867697 bp Feature: gene Location: 867777-868424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 868026-868377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86802 6-868377 bp Feature: gene Location: 868461-869066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 868500-868689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 868500-868689 bp Feature: domain Description: GIIM Note: maturase Location: 868758-868971 bp Feature: domain Description: GIIM Note: maturase Location: 868758-868971 bp Feature: gene Location: 869310-870200 bp Feature: domain Description: COG3666 Location: 869343-869796 bp Feature: domain Description: COG3666 Location: 869343-869796 bp Feature: gene Location: 870324-871145 bp Feature: domain Description: IstB_IS21 Location: 870480-871008 bp Feature: domain Description: IstB_IS2 1 Location: 870480-871008 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG3666 (Transposase ), IstB_IS21 (pfam01695)