myRT

myRT report for GCA_000368505.1_Acin_bere_NIPH_3_V1

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Seq: KB849462.1 Acinetobacter bereziniae NIPH 3 genomic scaffold acLrk-supercont1.2, whole genome shotgun sequence (137825 bp)
Overview 1 RT 1: 1-2754 bp Neighborhood of RT #1 [1, 2754] RVT-GII GIIM PHA02517 Feature: gene Location: 1-346 bp Feature: gene Location: 839-2080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1037-1694 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 037-1 694 bp Feature: domain Description: GIIM Note: maturase Location: 1772-2003 bp Feature: domain Description: GIIM Note: maturase Location: 1 772-2003 bp Feature: gene Location: 2133-2645 bp Feature: domain Description: PHA02517 Location: 2160-2625 bp Feature: domain Description: PHA0251 7 Location: 21 60-2625 bp Feature: gene Location: 2647-2754 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: KB849466.1 Acinetobacter bereziniae NIPH 3 genomic scaffold acLrk-supercont1.6, whole genome shotgun sequence (731524 bp)
Overview 1 RT 1: 594453-601581 bp Neighborhood of RT #1 [594453, 601583] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT_N RVT-GII GIIM sensory_box PRK11388 FhlA MSMEG_0572_fam Feature: gene Location: 594453-594788 bp Feature: domain Description: TnpB_IS66 Location: 594471-594759 bp Feature: domain Description: TnpB_IS66 Location: 594471-594759 bp Feature: gene Location: 594863-596263 bp Feature: domain Description: LZ_Tnp_IS66 Location: 595034-595259 bp Feature: domain Description: LZ_Tnp_IS66 Location: 595034-5952 59 bp Feature: domain Description: zf-IS66 Location: 595283-595409 bp Feature: domain Description: zf-IS66 Location: 5952 83-595409 bp Feature: domain Description: DDE_Tnp_IS66 Location: 595451-596243 bp Feature: domain Description: DDE_Tnp_IS66 Location: 595451-5962 43 bp Feature: gene Location: 596818-598479 bp Feature: RT Description: RVT_N Location: 596863-597106 bp Feature: RT Description: RVT_N Location: 596863-597106 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 597151-597787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 597151-597787 bp Feature: domain Description: GIIM Note: maturase Location: 597841-598072 bp Feature: domain Description: GIIM Note: maturase Location: 597841-598072 bp Feature: gene Location: 598946-600883 bp Feature: domain Description: sensory_box Location: 599024-599351 bp Feature: domain Description: sensory_box Location: 59902 4-599351 bp Feature: domain Description: PRK11388 Location: 599456-599591 bp Feature: domain Description: PRK11388 Location: 599456-599591 bp Feature: domain Description: FhlA Location: 599789-600878 bp Feature: domain Description: FhlA Location: 599789-600878 bp Feature: gene Location: 601101-601583 bp Feature: domain Description: MSMEG_0572_fam Location: 601107-601581 bp Feature: domain Description: MSMEG_0572 _fam Location: 601107-601581 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), sensory_box (TIGR00229), PRK11388 (DNA-binding transcriptional regulator DhaR; Provisional), FhlA (COG3604)
MSMEG_0572_fam (TIGR04044)