myRT

myRT report for GCA_000368665.1_Acin_grim_CIP_107470_V1

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Seq: KB849609.1 Acinetobacter junii CIP 107470 genomic scaffold acLrH-supercont1.20, whole genome shotgun sequence (1548943 bp)
Overview 1 RT 1: 367139-371226 bp 2 RT 2: 733495-738115 bp 3 RT 3: 944743-948459 bp Neighborhood of RT #1 [367139, 371327] PaaI Rhizobitoxine-FADS-like RVT-GII GIIM Rhizobitoxine-FADS-like PaaX Neighborhood of RT #2 [733495, 738115] PRK04210 PHA02517 RVT-GII GIIM HTH_Tnp_1 Neighborhood of RT #3 [944743, 948470] GstA PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 367139-367552 bp Feature: domain Description: PaaI Location: 367184-367547 bp Feature: domain Description: PaaI Location: 3671 84-367547 bp Feature: gene Location: 367574-368167 bp Feature: domain Description: Rhizobitoxine-FADS-like Location: 367598-368093 bp Feature: domain Description: Rhizobitoxine-FADS-like Location: 367598-368093 bp Feature: gene Location: 368220-369461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 368418-369075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36841 8-369075 bp Feature: domain Description: GIIM Note: maturase Location: 369153-369384 bp Feature: domain Description: GIIM Note: maturase Location: 3691 53-369384 bp Feature: gene Location: 369954-370391 bp Feature: domain Description: Rhizobitoxine-FADS-like Location: 370080-370377 bp Feature: domain Description: Rhizobitoxine-FADS-like Location: 370080-370377 bp Feature: gene Location: 370509-371327 bp Feature: domain Description: PaaX Location: 370578-371226 bp Feature: domain Description: PaaX Location: 370578-371 226 bp Feature: gene Location: 733495-735324 bp Feature: domain Description: PRK04210 Location: 733507-735316 bp Feature: domain Description: PRK0421 0 Location: 733507-73531 6 bp Feature: gene Location: 735406-735621 bp Feature: domain Description: PHA02517 Location: 735433-735619 bp Feature: domain Description: PHA0251 7 Location: 735433-73561 9 bp Feature: gene Location: 735674-736915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 735872-736529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 735872-736529 bp Feature: domain Description: GIIM Note: maturase Location: 736607-736838 bp Feature: domain Description: GIIM Note: maturase Location: 736607-736838 bp Feature: gene Location: 737637-737849 bp Feature: domain Description: HTH_Tnp_1 Location: 737646-737799 bp Feature: domain Description: HTH_Tnp_1 Location: 737646-737799 bp Feature: gene Location: 737924-738115 bp Feature: gene Location: 944743-945363 bp Feature: domain Description: GstA Location: 944746-945355 bp Feature: domain Description: GstA Location: 944746-945355 bp Feature: gene Location: 945498-945977 bp Feature: domain Description: PHA02517 Location: 945525-945969 bp Feature: domain Description: PHA0251 7 Location: 945525-945969 bp Feature: gene Location: 946030-947271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 946228-946885 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 946228-946885 bp Feature: domain Description: GIIM Note: maturase Location: 946963-947194 bp Feature: domain Description: GIIM Note: maturase Location: 946963-9471 94 bp Feature: gene Location: 947764-948138 bp Feature: domain Description: PHA02517 Location: 947779-948115 bp Feature: domain Description: PHA0251 7 Location: 947779-9481 1 5 bp Feature: gene Location: 948186-948470 bp Feature: domain Description: InsE Location: 948198-948459 bp Feature: domain Description: InsE Location: 9481 98-948459 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PaaI (COG2050), Rhizobitoxine-FADS-like (cd03510), RVT-GII, GIIM (pfam08388), PaaX (pfam07848), PRK04210 (phosphoenolpyruvate carboxykinase (GTP)), PHA02517 (putative transposase OrfB; Reviewed), HTH_Tnp_1 (pfam01527), GstA (COG0625), InsE (COG2963)