myRT

myRT report for GCA_000369065.1_Acin_haem_CIP_64_3_V1

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Seq: KB849799.1 Acinetobacter haemolyticus CIP 64.3 genomic scaffold acLrj-supercont1.10, whole genome shotgun sequence (571268 bp)
Overview 1 RT 1: 245812-252219 bp Neighborhood of RT #1 [245812, 252254] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT_N RVT-GII GIIM xerC Arabinose_bd HTH_ARAC Feature: gene Location: 245812-246156 bp Feature: domain Description: TnpB_IS66 Location: 245830-246124 bp Feature: domain Description: TnpB_IS66 Location: 245830-2461 24 bp Feature: gene Location: 246231-247652 bp Feature: domain Description: LZ_Tnp_IS66 Location: 246423-246648 bp Feature: domain Description: LZ_Tnp_IS66 Location: 246423-246648 bp Feature: domain Description: zf-IS66 Location: 246672-246798 bp Feature: domain Description: zf-IS66 Location: 246672-246798 bp Feature: domain Description: DDE_Tnp_IS66 Location: 246840-247632 bp Feature: domain Description: DDE_Tnp_IS66 Location: 246840-247632 bp Feature: gene Location: 248208-249869 bp Feature: RT Description: RVT_N Location: 248253-248496 bp Feature: RT Description: RVT_N Location: 248253-248496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 248541-249177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 248541 -2491 77 bp Feature: domain Description: GIIM Note: maturase Location: 249231-249462 bp Feature: domain Description: GIIM Note: maturase Location: 249231 -249462 bp Feature: gene Location: 250229-251002 bp Feature: domain Description: xerC Location: 250466-250991 bp Feature: domain Description: xerC Location: 250466-250991 bp Feature: gene Location: 251223-252254 bp Feature: domain Description: Arabinose_bd Location: 251286-251832 bp Feature: domain Description: Arabinose_bd Location: 251 286-251 832 bp Feature: domain Description: HTH_ARAC Location: 251976-252219 bp Feature: domain Description: HTH_ARAC Location: 251 976-25221 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), xerC (PRK01287), Arabinose_bd (pfam12625), HTH_ARAC (smart00342)

Seq: KB849802.1 Acinetobacter haemolyticus CIP 64.3 genomic scaffold acLrj-supercont1.13, whole genome shotgun sequence (346442 bp)
Overview 1 RT 1: 296216-303584 bp Neighborhood of RT #1 [296216, 303616] SecD secF RVT_N RVT-GII GIIM LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 TnpB_IS66 Feature: gene Location: 296216-298117 bp Feature: domain Description: SecD Location: 296444-298115 bp Feature: domain Description: SecD Location: 2 96444-2 98115 bp Feature: gene Location: 298128-299096 bp Feature: domain Description: secF Location: 298188-299046 bp Feature: domain Description: secF Location: 2 98188-2 99046 bp Feature: gene Location: 299559-301220 bp Feature: RT Description: RVT_N Location: 299604-299847 bp Feature: RT Description: RVT_N Location: 2 99604-2 99847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 299892-300528 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 99892 -30052 8 bp Feature: domain Description: GIIM Note: maturase Location: 300582-300813 bp Feature: domain Description: GIIM Note: maturase Location: 300582 -300813 bp Feature: gene Location: 301776-303197 bp Feature: domain Description: LZ_Tnp_IS66 Location: 301968-302193 bp Feature: domain Description: LZ_Tnp_IS66 Location: 301968-302 193 bp Feature: domain Description: zf-IS66 Location: 302217-302343 bp Feature: domain Description: zf-IS66 Location: 302 2 17-302 343 bp Feature: domain Description: DDE_Tnp_IS66 Location: 302385-303177 bp Feature: domain Description: DDE_Tnp_IS66 Location: 302 385-303177 bp Feature: gene Location: 303272-303616 bp Feature: domain Description: TnpB_IS66 Location: 303290-303584 bp Feature: domain Description: TnpB_IS66 Location: 3032 90-303584 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SecD (COG0342), secF (PRK13022), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), TnpB_IS66 (pfam05717)