myRT

myRT report for GCA_000371405.1_Clos_clos_CM201_V1

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Seq: KB850936.1 Clostridium clostridioforme CM201 genomic scaffold acBRh-supercont1.1, whole genome shotgun sequence (2393545 bp)
Overview 1 RT 1: 1184152-1192832 bp 2 RT 2: 1298254-1304654 bp 3 RT 3: 1375828-1385164 bp 4 RT 4: 1607069-1613036 bp 5 RT 5: 1850411-1856469 bp 6 RT 6: 2261962-2268486 bp Neighborhood of RT #1 [1184152, 1192843] nagB PurR RVT-GII GIIM E_set_CDase_PDE_N AmyAc_CMD HflB Neighborhood of RT #2 [1298254, 1304656] YitT_membrane SoxR RVT-GII GIIM YrpB PRK05654 PRK05724 Neighborhood of RT #3 [1375828, 1385178] HTH_21 PHA02517 RVT-GII GIIM Phage_int_SAM_1 INT_RitA_C_like INT_RitB_C_like Phage_int_SAM_1 INT_RitC_C_like RVT-GII BglG PTS_EIIA_2 thiolase Neighborhood of RT #4 [1607069, 1613056] NTP_transferase APH RVT-GII GIIM PBP2_phosphate_like_1 PstC Neighborhood of RT #5 [1850411, 1856477] RVT-GII RVT-GII HNHc DUF3852 Neighborhood of RT #6 [2261962, 2268488] IME4 VirB4_CagE TraC-F-type RVT-GII HNHc DUF3851 Feature: gene Location: 1184152-1184883 bp Ori: ENY96056.1 Feature: domain Description: nagB Location: 1184155-1184875 bp Feature: domain Description: nagB Location: 1 1 841 55-1 1 84875 bp Feature: gene Location: 1184890-1185942 bp Ori: ENY96057.1 Feature: domain Description: PurR Location: 1184905-1185919 bp Feature: domain Description: PurR Location: 1 1 84905-1 1 8591 9 bp Feature: gene Location: 1186769-1187662 bp Ori: ENY96058.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1186775-1187207 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 86775-1 1 87207 bp Feature: domain Description: GIIM Note: maturase Location: 1187270-1187498 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 87270-1 1 87498 bp Feature: gene Location: 1188506-1190632 bp Ori: ENY96059.1 Feature: domain Description: E_set_CDase_PDE_N Location: 1188563-1188851 bp Feature: domain Description: E_set_CDase_PDE_N Location: 1 1 88563-1 1 88851 bp Feature: domain Description: AmyAc_CMD Location: 1188887-1190294 bp Feature: domain Description: AmyAc_CMD Location: 1 1 88887-1 1 90294 bp Feature: gene Location: 1191029-1192843 bp Ori: ENY96060.1 Feature: domain Description: HflB Location: 1191074-1192832 bp Feature: domain Description: HflB Location: 1 1 91 074-1 1 92832 bp Feature: gene Location: 1298254-1298943 bp Ori: ENY95086.1 Feature: domain Description: YitT_membrane Location: 1298329-1298881 bp Feature: domain Description: YitT_membrane Location: 1 298329-1 298881 bp Feature: gene Location: 1298971-1299807 bp Ori: ENY95087.1 Feature: domain Description: SoxR Location: 1299007-1299301 bp Feature: domain Description: SoxR Location: 1 299007-1 299301 bp Feature: gene Location: 1300142-1301035 bp Ori: ENY95088.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1300148-1300580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3001 48-1 300580 bp Feature: domain Description: GIIM Note: maturase Location: 1300643-1300871 bp Feature: domain Description: GIIM Note: maturase Location: 1 300643-1 300871 bp Feature: gene Location: 1301799-1302932 bp Ori: ENY95089.1 Feature: domain Description: YrpB Location: 1301811-1302918 bp Feature: domain Description: YrpB Location: 1 301 81 1 -1 30291 8 bp Feature: gene Location: 1302932-1304656 bp Ori: ENY95090.1 Feature: domain Description: PRK05654 Location: 1302995-1303808 bp Feature: domain Description: PRK05654 Location: 1 302995-1 303808 bp Feature: domain Description: PRK05724 Location: 1303877-1304654 bp Feature: domain Description: PRK05724 Location: 1 303877-1 304654 bp Feature: gene Location: 1375828-1376220 bp Ori: ENY95161.1 Feature: domain Description: HTH_21 Location: 1375954-1376113 bp Feature: domain Description: HTH_21 Location: 1 375954-1 3761 1 3 bp Feature: gene Location: 1376278-1376613 bp Ori: ENY95162.1 Feature: domain Description: PHA02517 Location: 1376293-1376611 bp Feature: domain Description: PHA0251 7 Location: 1 376293-1 37661 1 bp Feature: gene Location: 1376781-1377440 bp Ori: ENY95163.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1376784-1376991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 376784-1 376991 bp Feature: domain Description: GIIM Note: maturase Location: 1377045-1377264 bp Feature: domain Description: GIIM Note: maturase Location: 1 377045-1 377264 bp Feature: gene Location: 1377611-1378846 bp Ori: ENY95164.1 Feature: domain Description: Phage_int_SAM_1 Location: 1377983-1378199 bp Feature: domain Description: Phage_int_SAM_1 Location: 1 377983-1 3781 99 bp Feature: domain Description: INT_RitA_C_like Location: 1378280-1378811 bp Feature: domain Description: INT_RitA_C_like Location: 1 378280-1 37881 1 bp Feature: gene Location: 1378839-1379819 bp Ori: ENY95165.1 Feature: domain Description: INT_RitB_C_like Location: 1379175-1379751 bp Feature: domain Description: INT_RitB_C_like Location: 1 3791 75-1 379751 bp Feature: gene Location: 1379806-1380174 bp Ori: ENY95166.1 Feature: domain Description: Phage_int_SAM_1 Location: 1379851-1380103 bp Feature: domain Description: Phage_int_SAM_1 Location: 1 379851 -1 3801 03 bp Feature: gene Location: 1380348-1380575 bp Ori: ENY95167.1 Feature: domain Description: INT_RitC_C_like Location: 1380351-1380498 bp Feature: domain Description: INT_RitC_C_like Location: 1 380351 -1 380498 bp Feature: gene Location: 1380991-1381173 bp Ori: ENY95168.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1381072-1381171 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 381 072-1 381 1 71 bp Feature: gene Location: 1381994-1383949 bp Ori: ENY94482.1 Feature: domain Description: BglG Location: 1381997-1383320 bp Feature: domain Description: BglG Location: 1 381 997-1 383320 bp Feature: domain Description: PTS_EIIA_2 Location: 1383554-1383935 bp Feature: domain Description: PTS_EIIA_2 Location: 1 383554-1 383935 bp Feature: gene Location: 1383997-1385178 bp Ori: ENY94483.1 Feature: domain Description: thiolase Location: 1384012-1385164 bp Feature: domain Description: thiolase Location: 1 38401 2-1 3851 64 bp Feature: gene Location: 1607069-1608004 bp Ori: ENY94681.1 Feature: domain Description: NTP_transferase Location: 1607093-1607855 bp Feature: domain Description: NTP_transferase Location: 1 607093-1 607855 bp Feature: gene Location: 1608001-1609140 bp Ori: ENY94682.1 Feature: domain Description: APH Location: 1608082-1608790 bp Feature: domain Description: APH Location: 1 608082-1 608790 bp Feature: gene Location: 1609932-1610825 bp Ori: ENY94683.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1609938-1610370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 609938-1 61 0370 bp Feature: domain Description: GIIM Note: maturase Location: 1610433-1610661 bp Feature: domain Description: GIIM Note: maturase Location: 1 61 0433-1 61 0661 bp Feature: gene Location: 1611134-1612090 bp Ori: ENY94684.1 Feature: domain Description: PBP2_phosphate_like_1 Location: 1611359-1612070 bp Feature: domain Description: PBP2_phosphate_like_1 Location: 1 61 1 359-1 61 2070 bp Feature: gene Location: 1612118-1613056 bp Ori: ENY94685.1 Feature: domain Description: PstC Location: 1612139-1613036 bp Feature: domain Description: PstC Location: 1 61 21 39-1 61 3036 bp Feature: gene Location: 1850411-1851025 bp Feature: gene Location: 1851096-1852733 bp Feature: gene Location: 1853463-1854419 bp Ori: ENY94913.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1853778-1854405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 853778-1 854405 bp Feature: gene Location: 1854410-1855348 bp Ori: ENY94914.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1854416-1854503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 85441 6-1 854503 bp Feature: domain Description: HNHc Note: nucleases Location: 1855061-1855229 bp Feature: domain Description: HNHc Note: nucleases Location: 1 855061 -1 855229 bp Feature: gene Location: 1855577-1856041 bp Feature: gene Location: 1856142-1856477 bp Ori: ENY94916.1 Feature: domain Description: DUF3852 Location: 1856148-1856469 bp Feature: domain Description: DUF3852 Location: 1 8561 48-1 856469 bp Feature: gene Location: 2261962-2262498 bp Ori: ENY94394.1 Feature: domain Description: IME4 Location: 2261968-2262481 bp Feature: domain Description: IME4 Location: 2261 968-2262481 bp Feature: gene Location: 2262862-2265108 bp Ori: ENY94395.1 Feature: domain Description: VirB4_CagE Location: 2263021-2263471 bp Feature: domain Description: VirB4_CagE Location: 2263021 -2263471 bp Feature: domain Description: TraC-F-type Location: 2263735-2265097 bp Feature: domain Description: TraC-F-type Location: 2263735-2265097 bp Feature: gene Location: 2265840-2267720 bp Ori: ENY94396.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2266173-2266890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22661 73-2266890 bp Feature: domain Description: HNHc Note: nucleases Location: 2267472-2267610 bp Feature: domain Description: HNHc Note: nucleases Location: 2267472-226761 0 bp Feature: gene Location: 2267902-2268117 bp Feature: gene Location: 2268114-2268488 bp Ori: ENY94398.1 Feature: domain Description: DUF3851 Location: 2268123-2268486 bp Feature: domain Description: DUF3851 Location: 22681 23-2268486 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT nagB (TIGR00502), PurR (COG1609), RVT-GII, GIIM (pfam08388), E_set_CDase_PDE_N (cd02857), AmyAc_CMD (cd11338), HflB (COG0465), YitT_membrane (pfam02588), SoxR (TIGR01950), YrpB (COG2070)
PRK05654 (acetyl-CoA carboxylase carboxyltransferase subunit beta), PRK05724 (acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated), HTH_21 (pfam13276), PHA02517 (putative transposase OrfB; Reviewed), Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188), INT_RitB_C_like (cd00797), INT_RitC_C_like (cd01182), BglG (COG3711), PTS_EIIA_2 (pfam00359)
thiolase (PRK06158), NTP_transferase (pfam00483), APH (pfam01636), PBP2_phosphate_like_1 (cd13653), PstC (COG0573), HNHc (smart00507), DUF3852 (pfam12963), IME4 (COG4725), VirB4_CagE (TIGR00929), TraC-F-type (TIGR02746)
DUF3851 (pfam12962)

Seq: KB850937.1 Clostridium clostridioforme CM201 genomic scaffold acBRh-supercont1.2, whole genome shotgun sequence (1153171 bp)
Overview 1 RT 1: 1127810-1131905 bp Neighborhood of RT #1 [1127810, 1131910] RVT-GII GIIM DUF3837 Feature: gene Location: 1127810-1128295 bp Feature: gene Location: 1128296-1129012 bp Feature: gene Location: 1130028-1130921 bp Ori: ENY90367.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1130034-1130466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1130034-1130466 bp Feature: domain Description: GIIM Note: maturase Location: 1130529-1130757 bp Feature: domain Description: GIIM Note: maturase Location: 113052 9-1130757 bp Feature: gene Location: 1131155-1131400 bp Feature: gene Location: 1131602-1131910 bp Ori: ENY90369.1 Feature: domain Description: DUF3837 Location: 1131608-1131905 bp Feature: domain Description: DUF3837 Location: 1131608-1131905 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF3837 (pfam12939)

Seq: KB850938.1 Clostridium clostridioforme CM201 genomic scaffold acBRh-supercont1.3, whole genome shotgun sequence (858163 bp)
Overview 1 RT 1: 63520-67082 bp 2 RT 2: 134156-139829 bp Neighborhood of RT #1 [63520, 67084] PRK13265 PRK14717 RVT-GII GIIM PrdX_deacylase TIGR00004 Neighborhood of RT #2 [134156, 139843] PRK12394 RVT-GII Resolvase Recombinase Zn_ribbon_recom InsE Feature: gene Location: 63520-63651 bp Ori: ENY90054.1 Feature: domain Description: PRK13265 Location: 63523-63649 bp Feature: domain Description: PRK13 265 Location: 63 523 -63 649 bp Feature: gene Location: 63667-63990 bp Ori: ENY90055.1 Feature: domain Description: PRK14717 Location: 63670-63988 bp Feature: domain Description: PRK14717 Location: 63 670-63 988 bp Feature: gene Location: 64784-65677 bp Ori: ENY90056.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64790-65222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64790-65222 bp Feature: domain Description: GIIM Note: maturase Location: 65285-65513 bp Feature: domain Description: GIIM Note: maturase Location: 65285-65513 bp Feature: gene Location: 65797-66393 bp Ori: ENY90057.1 Feature: domain Description: PrdX_deacylase Location: 65908-66367 bp Feature: domain Description: PrdX_deacylase Location: 65908-663 67 bp Feature: gene Location: 66716-67084 bp Ori: ENY90058.1 Feature: domain Description: TIGR00004 Location: 66722-67082 bp Feature: domain Description: TIGR00004 Location: 66722-67082 bp Feature: gene Location: 134156-135292 bp Ori: ENY89907.1 Feature: domain Description: PRK12394 Location: 134168-135278 bp Feature: domain Description: PRK123 94 Location: 13 4168-13 5278 bp Feature: gene Location: 135787-136596 bp Feature: gene Location: 136547-136879 bp Ori: ENY89909.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 136772-136877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 6772-13 6877 bp Feature: gene Location: 137348-138739 bp Ori: ENY89910.1 Feature: domain Description: Resolvase Location: 137438-137882 bp Feature: domain Description: Resolvase Location: 13 743 8-13 7882 bp Feature: domain Description: Recombinase Location: 137951-138275 bp Feature: domain Description: Recombinase Location: 13 7951-13 8275 bp Feature: domain Description: Zn_ribbon_recom Location: 138326-138503 bp Feature: domain Description: Zn_ribbon_recom Location: 13 83 26-13 8503 bp Feature: gene Location: 139511-139843 bp Ori: ENY89598.1 Feature: domain Description: InsE Location: 139520-139829 bp Feature: domain Description: InsE Location: 13 9520-13 9829 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13265 (glycine/sarcosine/betaine reductase complex protein A; Reviewed), PRK14717 (putative glycine/sarcosine/betaine reductase complex protein A; Provisional), RVT-GII, GIIM (pfam08388), PrdX_deacylase (cd04335), TIGR00004 (reactive intermediate/imine deaminase), PRK12394 (metallo-dependent hydrolase), Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408)
InsE (COG2963)

Seq: KB850939.1 Clostridium clostridioforme CM201 genomic scaffold acBRh-supercont1.4, whole genome shotgun sequence (751162 bp)
Overview 1 RT 1: 37778-44266 bp 2 RT 2: 394128-398980 bp 3 RT 3: 516396-522280 bp 4 RT 4: 558513-564660 bp 5 RT 5: 722478-729566 bp Neighborhood of RT #1 [37778, 44343] YicI YicI RVT-GII INT_RitC_C_like Neighborhood of RT #2 [394128, 399006] CoxS SAPR RVT-GII GIIM SAPR YwqE Neighborhood of RT #3 [516396, 522291] group_II_RT_mat RVT-GII GIIM pcrA pcrA Neighborhood of RT #4 [558513, 564899] RVT-GII HNHc DUF3852 DUF4259 Neighborhood of RT #5 [722478, 729667] Spr RVT-GII HNHc TraC-F-type PrgI Feature: gene Location: 37778-40276 bp Ori: ENY87045.1 Feature: domain Description: YicI Location: 37958-40043 bp Feature: domain Description: YicI Location: 37958-4 004 3 bp Feature: gene Location: 40336-42846 bp Ori: ENY87046.1 Feature: domain Description: YicI Location: 40471-42646 bp Feature: domain Description: YicI Location: 4 04 71-4 264 6 bp Feature: gene Location: 43511-43876 bp Ori: ENY87007.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43631-43805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 3631-4 3805 bp Feature: gene Location: 43927-44343 bp Ori: ENY87008.1 Feature: domain Description: INT_RitC_C_like Location: 43930-44266 bp Feature: domain Description: INT_RitC_C_like Location: 4 3930-4 4 266 bp Feature: gene Location: 394128-394613 bp Ori: ENY86912.1 Feature: domain Description: CoxS Location: 394143-394590 bp Feature: domain Description: CoxS Location: 394 14 3-394 590 bp Feature: gene Location: 394953-395408 bp Ori: ENY86913.1 Feature: domain Description: SAPR Location: 394971-395316 bp Feature: domain Description: SAPR Location: 394 971-395316 bp Feature: gene Location: 395994-397154 bp Ori: ENY86914.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 396084-396699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 396084 -396699 bp Feature: domain Description: GIIM Note: maturase Location: 396762-396990 bp Feature: domain Description: GIIM Note: maturase Location: 396762-396990 bp Feature: gene Location: 397790-398248 bp Ori: ENY86915.1 Feature: domain Description: SAPR Location: 397802-398228 bp Feature: domain Description: SAPR Location: 397802-398228 bp Feature: gene Location: 398245-399006 bp Ori: ENY86916.1 Feature: domain Description: YwqE Location: 398260-398980 bp Feature: domain Description: YwqE Location: 398260-398980 bp Feature: gene Location: 516396-516716 bp Feature: gene Location: 516898-517104 bp Ori: ENY86245.1 Feature: domain Description: group_II_RT_mat Note: maturase Location: 516934-517096 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 516934 -517096 bp Feature: gene Location: 517693-518853 bp Ori: ENY86246.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 517783-518398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 517783-518398 bp Feature: domain Description: GIIM Note: maturase Location: 518461-518689 bp Feature: domain Description: GIIM Note: maturase Location: 5184 61-518689 bp Feature: gene Location: 519426-519740 bp Feature: gene Location: 519949-522291 bp Ori: ENY86248.1 Feature: domain Description: pcrA Location: 519964-521872 bp Feature: domain Description: pcrA Location: 519964 -521872 bp Feature: domain Description: pcrA Location: 522118-522280 bp Feature: domain Description: pcrA Location: 522118-522280 bp Feature: gene Location: 558513-559847 bp Feature: gene Location: 560587-561003 bp Feature: gene Location: 561733-563619 bp Ori: ENY86292.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 562048-562777 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56204 8-562777 bp Feature: domain Description: HNHc Note: nucleases Location: 563332-563500 bp Feature: domain Description: HNHc Note: nucleases Location: 563332-563500 bp Feature: gene Location: 563925-564263 bp Ori: ENY86293.1 Feature: domain Description: DUF3852 Location: 563931-564255 bp Feature: domain Description: DUF3852 Location: 563931-564 255 bp Feature: gene Location: 564312-564899 bp Ori: ENY86294.1 Feature: domain Description: DUF4259 Location: 564318-564660 bp Feature: domain Description: DUF4 259 Location: 564 318-564 660 bp Feature: gene Location: 722478-724193 bp Ori: ENY84616.1 Feature: domain Description: Spr Location: 723846-724170 bp Feature: domain Description: Spr Location: 72384 6-724 170 bp Feature: gene Location: 724174-724440 bp Feature: gene Location: 724574-726454 bp Ori: ENY84618.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 724907-725624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 724 907-725624 bp Feature: domain Description: HNHc Note: nucleases Location: 726206-726344 bp Feature: domain Description: HNHc Note: nucleases Location: 726206-72634 4 bp Feature: gene Location: 727186-729318 bp Ori: ENY84619.1 Feature: domain Description: TraC-F-type Location: 727912-729301 bp Feature: domain Description: TraC-F-type Location: 727912-729301 bp Feature: gene Location: 729278-729667 bp Ori: ENY84620.1 Feature: domain Description: PrgI Location: 729293-729566 bp Feature: domain Description: PrgI Location: 729293-729566 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YicI (COG1501), RVT-GII, INT_RitC_C_like (cd01182), CoxS (COG2080), SAPR (COG3947), GIIM (pfam08388), YwqE (COG4464), group_II_RT_mat (TIGR04416), pcrA (TIGR01073), HNHc (smart00507)
DUF3852 (pfam12963), DUF4259 (pfam14078), Spr (COG0791), TraC-F-type (TIGR02746), PrgI (pfam12666)

Seq: KB850940.1 Clostridium clostridioforme CM201 genomic scaffold acBRh-supercont1.5, whole genome shotgun sequence (235702 bp)
Overview 1 RT 1: 33286-39790 bp Neighborhood of RT #1 [33286, 39819] PrgI VirB4_CagE VirB4_CagE RVT-GII HNHc N6_N4_Mtase Feature: gene Location: 33286-33687 bp Ori: ENY83758.1 Feature: domain Description: PrgI Location: 33301-33574 bp Feature: domain Description: PrgI Location: 33301-335 74 bp Feature: gene Location: 33638-35860 bp Ori: ENY83759.1 Feature: domain Description: VirB4_CagE Location: 33767-34205 bp Feature: domain Description: VirB4_CagE Location: 33767-34205 bp Feature: domain Description: VirB4_CagE Location: 34442-35834 bp Feature: domain Description: VirB4_CagE Location: 34442-35 834 bp Feature: gene Location: 36592-38472 bp Ori: ENY83760.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36925-37642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36925 -37642 bp Feature: domain Description: HNHc Note: nucleases Location: 38224-38362 bp Feature: domain Description: HNHc Note: nucleases Location: 38224-38362 bp Feature: gene Location: 38654-38863 bp Feature: gene Location: 38860-39819 bp Ori: ENY83762.1 Feature: domain Description: N6_N4_Mtase Location: 38938-39790 bp Feature: domain Description: N6_N4_Mtase Location: 38938-39790 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PrgI (pfam12666), VirB4_CagE (TIGR00929), RVT-GII, HNHc (smart00507), N6_N4_Mtase (pfam01555)

Seq: KB850941.1 Clostridium clostridioforme CM201 genomic scaffold acBRh-supercont1.6, whole genome shotgun sequence (151331 bp)
Overview 1 RT 1: 131910-137901 bp Neighborhood of RT #1 [131910, 139214] COG3943 RVT-Retrons Virulence_RhuM KAP_NTPase Feature: gene Location: 131910-131995 bp Feature: gene Location: 132391-133413 bp Ori: ENY83493.1 Feature: domain Description: COG3943 Location: 132409-133378 bp Feature: domain Description: COG3943 Location: 132409-133378 bp Feature: gene Location: 133506-135485 bp Ori: ENY83494.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 134643-135207 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1346 43-135207 bp Feature: gene Location: 135913-136521 bp Ori: ENY83495.1 Feature: domain Description: Virulence_RhuM Location: 135973-136453 bp Feature: domain Description: Virulence_RhuM Location: 135973-136 453 bp Feature: gene Location: 136995-139214 bp Ori: ENY83496.1 Feature: domain Description: KAP_NTPase Location: 137049-137901 bp Feature: domain Description: KAP_NTPase Location: 137049-137901 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3943 (Uncharacterized conserved protein ), RVT-Retrons, Virulence_RhuM (pfam13310), KAP_NTPase (pfam07693)