myRT

myRT report for GCA_000371545.1_Clos_clos_90A6_V1

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Seq: KB851028.1 Clostridium clostridioforme 90A6 genomic scaffold acBSb-supercont1.14, whole genome shotgun sequence (127439 bp) Associated domains: Uup (COG0488), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), YtxK (COG0827), COG4646 (Adenine-specific DNA methylase, N12 class ), KOG0390 (KOG0390, DNA repair protein, SNF2 family ), RadC (pfam04002), 3D_containing_proteins (cd14667), NlpD (COG0739)
Spr (COG0791), HNHc (smart00507)

Seq: KB851035.1 Clostridium clostridioforme 90A6 genomic scaffold acBSb-supercont1.20, whole genome shotgun sequence (30331 bp) Associated domains: Maff2 (pfam12750), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), IME4 (COG4725), PrgI (pfam12666), VirB4_CagE (TIGR00929), TraC-F-type (TIGR02746)

Seq: KB851033.1 Clostridium clostridioforme 90A6 genomic scaffold acBSb-supercont1.19, whole genome shotgun sequence (42257 bp) Associated domains: Spr (COG0791), RVT-GII, HNHc (smart00507)

Seq: KB851041.1 Clostridium clostridioforme 90A6 genomic scaffold acBSb-supercont1.6, whole genome shotgun sequence (235799 bp) Associated domains: PrgI (pfam12666), TraC-F-type (TIGR02746), RVT-GII, HNHc (smart00507), Spr (COG0791), DUF4259 (pfam14078), DUF3852 (pfam12963), pcrA (TIGR01073), GIIM (pfam08388), group_II_RT_mat (TIGR04416)

Seq: KB851029.1 Clostridium clostridioforme 90A6 genomic scaffold acBSb-supercont1.15, whole genome shotgun sequence (110809 bp) Associated domains: N6_N4_Mtase (pfam01555), RVT-GII, HNHc (smart00507)

Seq: KB851026.1 Clostridium clostridioforme 90A6 genomic scaffold acBSb-supercont1.12, whole genome shotgun sequence (151076 bp) Associated domains: PHA02517 (putative transposase OrfB; Reviewed), Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-GII, PRK12394 (metallo-dependent hydrolase)

Seq: KB851023.1 Clostridium clostridioforme 90A6 genomic scaffold acBSb-supercont1.1, whole genome shotgun sequence (1356700 bp) Associated domains: RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Spr (COG0791)

Seq: KB851034.1 Clostridium clostridioforme 90A6 genomic scaffold acBSb-supercont1.2, whole genome shotgun sequence (1201946 bp) Associated domains: TTRAP (pfam14203), YtxK (COG0827), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), KOG0390 (KOG0390, DNA repair protein, SNF2 family ), MobC (pfam05713)

Seq: KB851025.1 Clostridium clostridioforme 90A6 genomic scaffold acBSb-supercont1.11, whole genome shotgun sequence (160215 bp) Associated domains: YitT_membrane (pfam02588), SoxR (TIGR01950), RVT-GII, GIIM (pfam08388), YrpB (COG2070), PRK05654 (acetyl-CoA carboxylase carboxyltransferase subunit beta), PRK05724 (acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated), HTH_21 (pfam13276), PHA02517 (putative transposase OrfB; Reviewed), recomb_XerD (TIGR02225)
INT_RitA_C_like (cd01188)

Seq: KB851042.1 Clostridium clostridioforme 90A6 genomic scaffold acBSb-supercont1.7, whole genome shotgun sequence (222998 bp) Associated domains: PrgI (pfam12666), VirB4_CagE (TIGR00929), TraC-F-type (TIGR02746), RVT-GII, HNHc (smart00507)

Seq: KB851039.1 Clostridium clostridioforme 90A6 genomic scaffold acBSb-supercont1.4, whole genome shotgun sequence (482377 bp) Associated domains: RVT-GII, HNHc (smart00507), DUF3852 (pfam12963), PrgI (pfam12666), VirB4_CagE (TIGR00929), TraC-F-type (TIGR02746), DUF3851 (pfam12962)

Seq: KB851038.1 Clostridium clostridioforme 90A6 genomic scaffold acBSb-supercont1.3, whole genome shotgun sequence (582564 bp) Associated domains: NTP_transferase (pfam00483), APH (pfam01636), RVT-GII, GIIM (pfam08388), PBP2_phosphate_like_1 (cd13653), PstC (COG0573)

Seq: KB851040.1 Clostridium clostridioforme 90A6 genomic scaffold acBSb-supercont1.5, whole genome shotgun sequence (404819 bp) Associated domains: recomb_XerD (TIGR02225), Zn_Tnp_IS91 (pfam14319), Y2_Tnp (pfam04986), RVT-GII, GIIM (pfam08388), PinE (COG1961), Zn_ribbon_recom (pfam13408), Recombinase (pfam07508), HTH_17 (pfam12728), RVT_N (pfam13655)
FolA (COG0262), TraC-F-type (TIGR02746), HNHc (smart00507)

Seq: KB851024.1 Clostridium clostridioforme 90A6 genomic scaffold acBSb-supercont1.10, whole genome shotgun sequence (167142 bp) Associated domains: KAP_NTPase (pfam07693), Virulence_RhuM (pfam13310), RVT-Retrons, COG3943 (Uncharacterized conserved protein ), TnpB_IS66 (pfam05717)