myRT

myRT report for GCA_000371625.1_Clos_buty_60E_3_V1

Download annotations/find similar RTs

Seq: KB851132.1 Clostridium butyricum 60E.3 genomic scaffold actYk-supercont1.4, whole genome shotgun sequence (311466 bp)
Overview 1 RT 1: 98880-106508 bp Neighborhood of RT #1 [98880, 106534] CpsB WcaJ_sugtrans RVT-GII GIIM Wzy_C DUF820 Feature: gene Location: 98880-99959 bp Ori: ENZ30841.1 Feature: domain Description: CpsB Location: 98889-99885 bp Feature: domain Description: CpsB Location: 98889-99885 bp Feature: gene Location: 100263-101684 bp Ori: ENZ30842.1 Feature: domain Description: WcaJ_sugtrans Location: 100311-101628 bp Feature: domain Description: WcaJ_sugtrans Location: 1 0031 1 -1 01 628 bp Feature: gene Location: 101780-103195 bp Ori: ENZ30843.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102137-102755 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 021 37-1 02755 bp Feature: domain Description: GIIM Note: maturase Location: 102806-103031 bp Feature: domain Description: GIIM Note: maturase Location: 1 02806-1 03031 bp Feature: gene Location: 104086-105933 bp Ori: ENZ30844.1 Feature: domain Description: Wzy_C Location: 104827-105709 bp Feature: domain Description: Wzy_C Location: 1 04827-1 05709 bp Feature: gene Location: 105983-106534 bp Ori: ENZ30845.1 Feature: domain Description: DUF820 Location: 106055-106508 bp Feature: domain Description: DUF820 Location: 1 06055-1 06508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CpsB (COG0836), WcaJ_sugtrans (TIGR03023), RVT-GII, GIIM (pfam08388), Wzy_C (pfam04932), DUF820

Seq: KB851130.1 Clostridium butyricum 60E.3 genomic scaffold actYk-supercont1.2, whole genome shotgun sequence (790579 bp)
Overview 1 RT 1: 277854-286473 bp Neighborhood of RT #1 [277854, 286473] MarR ADA RVT-Retrons Feature: gene Location: 277854-278285 bp Ori: ENZ32779.1 Feature: domain Description: MarR Location: 277899-278274 bp Feature: domain Description: MarR Location: 2 77899-2 782 74 bp Feature: gene Location: 278644-279636 bp Ori: ENZ32780.1 Feature: domain Description: ADA Location: 278659-279628 bp Feature: domain Description: ADA Location: 2 78659-2 7962 8 bp Feature: gene Location: 280224-281732 bp Ori: ENZ32781.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 280860-281508 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 80860-2 81508 bp Feature: gene Location: 281729-283537 bp Feature: gene Location: 283537-286473 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MarR (pfam01047), ADA (cd01320), RVT-Retrons

Seq: KB851131.1 Clostridium butyricum 60E.3 genomic scaffold actYk-supercont1.3, whole genome shotgun sequence (481134 bp)
Overview 1 RT 1: 267467-272728 bp Neighborhood of RT #1 [267467, 272728] MEDS RVT-UG17 SLATT_5 Feature: gene Location: 267467-268207 bp Ori: ENZ31076.1 Feature: domain Description: MEDS Location: 267692-268166 bp Feature: domain Description: MEDS Location: 267692-268166 bp Feature: gene Location: 268678-269406 bp Feature: gene Location: 269987-271297 bp Ori: ENZ31078.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 270215-270800 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 270215-270800 bp Feature: gene Location: 271299-271856 bp Ori: ENZ31079.1 Feature: domain Description: SLATT_5 Location: 271305-271836 bp Feature: domain Description: SLATT_5 Location: 2713 05-27183 6 bp Feature: gene Location: 272564-272728 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MEDS (pfam14417), RVT-UG17, SLATT_5 (pfam18160)

Seq: KB851133.1 Clostridium butyricum 60E.3 genomic scaffold actYk-supercont1.5, whole genome shotgun sequence (270493 bp)
Overview 1 RT 1: 132985-138305 bp Neighborhood of RT #1 [132985, 138328] Y2_Tnp Transposase_mut RVT-GII HNHc InsE PHA02517 Feature: gene Location: 132985-133143 bp Ori: ENZ30335.1 Feature: domain Description: Y2_Tnp Location: 133027-133126 bp Feature: domain Description: Y2_Tnp Location: 133027-133126 bp Feature: gene Location: 134102-134284 bp Ori: ENZ30336.1 Feature: domain Description: Transposase_mut Location: 134144-134282 bp Feature: domain Description: Transposase_mut Location: 134 14 4 -134 282 bp Feature: gene Location: 135429-137111 bp Ori: ENZ30337.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 135624-136311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 135624 -136311 bp Feature: domain Description: HNHc Note: nucleases Location: 136863-137001 bp Feature: domain Description: HNHc Note: nucleases Location: 136863-137001 bp Feature: gene Location: 137145-137453 bp Ori: ENZ30338.1 Feature: domain Description: InsE Location: 137226-137445 bp Feature: domain Description: InsE Location: 137226-1374 4 5 bp Feature: gene Location: 137507-138328 bp Ori: ENZ30339.1 Feature: domain Description: PHA02517 Location: 137522-138305 bp Feature: domain Description: PHA02517 Location: 137522-138305 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Y2_Tnp (pfam04986), Transposase_mut (pfam00872), RVT-GII, HNHc (smart00507), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed)