myRT

myRT report for GCA_000371685.1_Clos_bolt_90B3_V1

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Seq: KB851181.1 Clostridium bolteae 90B3 genomic scaffold acBRc-supercont1.4, whole genome shotgun sequence (304270 bp)
Overview 1 RT 1: 147381-152498 bp Neighborhood of RT #1 [147381, 152656] AraH MglA RVT-GII RVT-GII GIIM DDE_5 DDE_Tnp_1 Feature: gene Location: 147381-148334 bp Ori: ENZ36842.1 Feature: domain Description: AraH Location: 147396-148305 bp Feature: domain Description: AraH Location: 1 47396-1 48305 bp Feature: gene Location: 148315-149076 bp Ori: ENZ36843.1 Feature: domain Description: MglA Location: 148327-149056 bp Feature: domain Description: MglA Location: 1 48327-1 49056 bp Feature: gene Location: 149844-150341 bp Ori: ENZ36844.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 150210-150285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5021 0-1 50285 bp Feature: gene Location: 150338-150886 bp Ori: ENZ36845.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 150365-150518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 50365-1 5051 8 bp Feature: domain Description: GIIM Note: maturase Location: 150578-150803 bp Feature: domain Description: GIIM Note: maturase Location: 1 50578-1 50803 bp Feature: gene Location: 151368-152000 bp Ori: ENZ36846.1 Feature: domain Description: DDE_5 Location: 151524-151890 bp Feature: domain Description: DDE_5 Location: 1 51 524-1 51 890 bp Feature: gene Location: 151988-152656 bp Ori: ENZ36847.1 Feature: domain Description: DDE_Tnp_1 Location: 152030-152498 bp Feature: domain Description: DDE_Tnp_1 Location: 1 52030-1 52498 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AraH (COG1172), MglA (COG1129), RVT-GII, GIIM (pfam08388), DDE_5 (pfam13546), DDE_Tnp_1 (pfam01609)

Seq: KB851178.1 Clostridium bolteae 90B3 genomic scaffold acBRc-supercont1.1, whole genome shotgun sequence (3794250 bp)
Overview 1 RT 1: 1266922-1271650 bp Neighborhood of RT #1 [1266922, 1271661] UgpA UgpE RVT-Retrons NAT_SF YoaP spoVFB Feature: gene Location: 1266922-1267800 bp Ori: ENZ44661.1 Feature: domain Description: UgpA Location: 1266940-1267786 bp Feature: domain Description: UgpA Location: 12 66940-12 67786 bp Feature: gene Location: 1267815-1268648 bp Ori: ENZ44662.1 Feature: domain Description: UgpE Location: 1267830-1268643 bp Feature: domain Description: UgpE Location: 12 67830-12 68643 bp Feature: gene Location: 1269068-1270075 bp Ori: ENZ44663.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1269233-1269788 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 692 33-12 69788 bp Feature: gene Location: 1270087-1270830 bp Ori: ENZ44664.1 Feature: domain Description: NAT_SF Location: 1270294-1270411 bp Feature: domain Description: NAT_SF Location: 12 702 94-12 70411 bp Feature: domain Description: YoaP Location: 1270693-1270819 bp Feature: domain Description: YoaP Location: 12 70693-12 70819 bp Feature: gene Location: 1271077-1271661 bp Ori: ENZ44665.1 Feature: domain Description: spoVFB Location: 1271080-1271650 bp Feature: domain Description: spoVFB Location: 12 71080-12 71650 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UgpA (COG1175), UgpE (COG0395), RVT-Retrons, NAT_SF (cl17182), YoaP (pfam14268), spoVFB (PRK08305)