myRT

myRT report for GCA_000372345.1_ASM37234v1

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Seq: AQUS01000047.1 Sinorhizobium medicae WSM1369 A3C5DRAFT_scaffold_260.261_C, whole genome shotgun sequence (1690 bp)
Overview 1 RT 1: 3-1041 bp Neighborhood of RT #1 [3, 1442] DDE_3 RVT-GII RVT-GII Feature: gene Location: 3-230 bp Feature: domain Description: DDE_3 Location: 15-228 bp Feature: domain Description: DDE_3 Location: 1 5-228 bp Feature: gene Location: 312-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585-915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585-91 5 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 915-1041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 5-1 041 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), RVT-GII

Seq: AQUS01000068.1 Sinorhizobium medicae WSM1369 A3C5DRAFT_scaffold_239.240_C, whole genome shotgun sequence (2213 bp)
Overview 1 RT 1: 84-2123 bp Neighborhood of RT #1 [84, 2123] RVT-GII GIIM Feature: gene Location: 84-1601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 387-1149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 387-1149 bp Feature: domain Description: GIIM Note: maturase Location: 1218-1488 bp Feature: domain Description: GIIM Note: maturase Location: 12 18-1488 bp Feature: gene Location: 1992-2123 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AQUS01000112.1 Sinorhizobium medicae WSM1369 A3C5DRAFT_scaffold_195.196_C, whole genome shotgun sequence (3883 bp)
Overview 1 RT 1: 2527-3800 bp Neighborhood of RT #1 [2527, 3841] RVT-GII Feature: gene Location: 2527-2769 bp Feature: gene Location: 2797-2955 bp Feature: gene Location: 3518-3841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3734-3800 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 73 4-3 800 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: AQUS01000290.1 Sinorhizobium medicae WSM1369 A3C5DRAFT_scaffold_17.18_C, whole genome shotgun sequence (78535 bp)
Overview 1 RT 1: 68788-74608 bp Neighborhood of RT #1 [68788, 74631] COG1878 CMD RVT-GII UvrD uvrD Feature: gene Location: 68788-69609 bp Feature: domain Description: COG1878 Location: 68932-69607 bp Feature: domain Description: COG1878 Location: 68932-69607 bp Feature: gene Location: 69629-69958 bp Feature: domain Description: CMD Location: 69758-69950 bp Feature: domain Description: CMD Location: 69758-69950 bp Feature: gene Location: 70022-71497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70430-71120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 704 30-71120 bp Feature: gene Location: 71843-71974 bp Feature: gene Location: 72079-74631 bp Feature: domain Description: UvrD Location: 72214-74248 bp Feature: domain Description: UvrD Location: 72214 -74 24 8 bp Feature: domain Description: uvrD Location: 74455-74608 bp Feature: domain Description: uvrD Location: 74 4 55-74 608 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG1878 (Kynurenine formamidase ), CMD (pfam02627), RVT-GII, UvrD (COG0210), uvrD (TIGR01075)