myRT

myRT report for GCA_000372525.1_ASM37252v1

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Seq: AQUR01000050.1 Cupriavidus taiwanensis STM 6070 strain STM6070 A3AGDRAFT_scaffold_57.58_C, whole genome shotgun sequence (12815 bp)
Overview 1 RT 1: 2661-8715 bp Neighborhood of RT #1 [2661, 8780] DUF4158 RVT-GII Tannase AcrR Feature: gene Location: 2661-3344 bp Feature: gene Location: 3402-3728 bp Feature: domain Description: DUF4158 Location: 3438-3717 bp Feature: domain Description: DUF41 58 Location: 3438-371 7 bp Feature: gene Location: 3915-5738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4677-5367 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4677-5367 bp Feature: gene Location: 6087-7805 bp Feature: domain Description: Tannase Location: 6369-7797 bp Feature: domain Description: Tannase Location: 6369-7797 bp Feature: gene Location: 7989-8780 bp Feature: domain Description: AcrR Location: 8163-8715 bp Feature: domain Description: AcrR Location: 81 63-871 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4158 (pfam13700), RVT-GII, Tannase (pfam07519), AcrR (COG1309)

Seq: AQUR01000105.1 Cupriavidus taiwanensis STM 6070 strain STM6070 A3AGDRAFT_scaffold_2.3_C, whole genome shotgun sequence (392959 bp)
Overview 1 RT 1: 141944-147478 bp Neighborhood of RT #1 [141944, 147525] RpmB PRK00024 RVT-GII GIIM HNHc SlpA ispH Feature: gene Location: 141944-142141 bp Feature: domain Description: RpmB Location: 141947-142133 bp Feature: domain Description: RpmB Location: 141947-142 133 bp Feature: gene Location: 142368-143054 bp Feature: domain Description: PRK00024 Location: 142371-143031 bp Feature: domain Description: PRK0002 4 Location: 142 371-143031 bp Feature: gene Location: 144624-145925 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 144627-145215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14462 7-1452 15 bp Feature: domain Description: GIIM Note: maturase Location: 145266-145500 bp Feature: domain Description: GIIM Note: maturase Location: 1452 66-145500 bp Feature: domain Description: HNHc Note: nucleases Location: 145722-145884 bp Feature: domain Description: HNHc Note: nucleases Location: 14572 2 -145884 bp Feature: gene Location: 146036-146524 bp Feature: domain Description: SlpA Location: 146093-146519 bp Feature: domain Description: SlpA Location: 146093-146519 bp Feature: gene Location: 146560-147525 bp Feature: domain Description: ispH Location: 146593-147478 bp Feature: domain Description: ispH Location: 146593-147478 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RpmB (COG0227), PRK00024 (DNA repair protein RadC), RVT-GII, GIIM (pfam08388), HNHc (smart00507), SlpA (COG1047), ispH (PRK01045)