myRT

myRT report for GCA_000372925.1_ASM37292v1

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Seq: KB889976.1 Teredinibacter turnerae T0609 genomic scaffold B013DRAFT_scaffold00002.2, whole genome shotgun sequence (565782 bp)
Overview 1 RT 1: 149001-152178 bp Neighborhood of RT #1 [149001, 152178] HTH_XRE int RVT-Retrons HTH_XRE Feature: gene Location: 149001-149720 bp Feature: domain Description: HTH_XRE Location: 149022-149163 bp Feature: domain Description: HTH_XRE Location: 1 49022-1 491 63 bp Feature: gene Location: 149724-150713 bp Feature: domain Description: int Location: 149727-150705 bp Feature: domain Description: int Location: 1 49727-1 50705 bp Feature: gene Location: 150731-151714 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 150926-151469 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 50926-1 51 469 bp Feature: gene Location: 151689-152000 bp Feature: domain Description: HTH_XRE Location: 151704-151866 bp Feature: domain Description: HTH_XRE Location: 1 51 704-1 51 866 bp Feature: gene Location: 152032-152178 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), int (PHA02601), RVT-Retrons

Seq: KB889984.1 Teredinibacter turnerae T0609 genomic scaffold B013DRAFT_scaffold00010.10, whole genome shotgun sequence (163905 bp)
Overview 1 RT 1: 18516-25693 bp Neighborhood of RT #1 [18516, 25693] TIGR03986 CRISPR_Cas6 RVT-CRISPR Feature: gene Location: 18516-20717 bp Feature: domain Description: TIGR03986 Location: 18537-20355 bp Feature: domain Description: TIGR03986 Location: 18537-2 0355 bp Feature: gene Location: 20714-22336 bp Feature: gene Location: 22845-24872 bp Feature: domain Description: CRISPR_Cas6 Location: 23409-23703 bp Feature: domain Description: CRISPR_Cas6 Location: 2 3409-2 3703 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 24036-24579 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2 4036-2 4579 bp Feature: gene Location: 24755-25231 bp Feature: gene Location: 25559-25693 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR03986 (CRISPR-associated protein), CRISPR_Cas6 (pfam10040), RVT-CRISPR

Seq: KB889991.1 Teredinibacter turnerae T0609 genomic scaffold B013DRAFT_scaffold00017.17, whole genome shotgun sequence (120432 bp)
Overview 1 RT 1: 84363-90184 bp Neighborhood of RT #1 [84363, 92025] Response_reg EAL RVT-GII GIIM RhaT Cellulase Feature: gene Location: 84363-85568 bp Feature: domain Description: Response_reg Location: 84378-84717 bp Feature: domain Description: Response_reg Location: 843 78-84717 bp Feature: domain Description: EAL Location: 84795-85500 bp Feature: domain Description: EAL Location: 84795-85500 bp Feature: gene Location: 85759-86118 bp Feature: gene Location: 86342-87631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86597-87266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86597-87266 bp Feature: domain Description: GIIM Note: maturase Location: 87335-87551 bp Feature: domain Description: GIIM Note: maturase Location: 873 3 5-87551 bp Feature: gene Location: 88317-89207 bp Feature: domain Description: RhaT Location: 88353-89187 bp Feature: domain Description: RhaT Location: 883 53 -89187 bp Feature: gene Location: 89305-92025 bp Feature: domain Description: Cellulase Location: 89503-90184 bp Feature: domain Description: Cellulase Location: 89503 -90184 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Response_reg (pfam00072), EAL (smart00052), RVT-GII, GIIM (pfam08388), RhaT (TIGR00776), Cellulase (pfam00150)

Seq: KB890001.1 Teredinibacter turnerae T0609 genomic scaffold B013DRAFT_scaffold00027.27, whole genome shotgun sequence (25049 bp)
Overview 1 RT 1: 13569-17355 bp Neighborhood of RT #1 [13569, 17355] RVT-GII SMI1_KNR4 Feature: gene Location: 13569-14246 bp Feature: gene Location: 14459-14941 bp Feature: gene Location: 15742-16029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15769-15943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15769-1594 3 bp Feature: gene Location: 16425-16937 bp Feature: domain Description: SMI1_KNR4 Location: 16485-16908 bp Feature: domain Description: SMI1_KNR4 Location: 164 85-16908 bp Feature: gene Location: 17053-17355 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, SMI1_KNR4 (smart00860)