myRT

myRT report for GCA_000373085.1_ASM37308v1

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Seq: KB890331.1 Bacteroides massiliensis B84634 = DSM 17679 genomic scaffold B035DRAFT_scaffold_2.3, whole genome shotgun sequence (206447 bp)
Overview 1 RT 1: 89602-99045 bp Neighborhood of RT #1 [89602, 99045] Laminin_G_3 Laminin_G_3 RVT-DGRs Feature: gene Location: 89602-96321 bp Feature: domain Description: Laminin_G_3 Location: 91045-91123 bp Feature: domain Description: Laminin_G_3 Location: 91 045-91 1 23 bp Feature: domain Description: Laminin_G_3 Location: 91774-92200 bp Feature: domain Description: Laminin_G_3 Location: 91 774-92200 bp Feature: gene Location: 96565-96735 bp Feature: gene Location: 96837-98141 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 97047-97725 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 97047-97725 bp Feature: gene Location: 98138-98623 bp Feature: gene Location: 98803-99045 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-DGRs

Seq: KB890342.1 Bacteroides massiliensis B84634 = DSM 17679 genomic scaffold B035DRAFT_scaffold_3.4, whole genome shotgun sequence (205472 bp)
Overview 1 RT 1: 159309-164867 bp Neighborhood of RT #1 [159309, 164938] RVT-DGRs Dam Feature: gene Location: 159309-160208 bp Feature: gene Location: 160222-161658 bp Feature: gene Location: 162018-163490 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 162354-163014 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 162 354-163014 bp Feature: gene Location: 163504-163914 bp Feature: gene Location: 164096-164938 bp Feature: domain Description: Dam Location: 164099-164867 bp Feature: domain Description: Dam Location: 164099-164867 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Dam (pfam05869)

Seq: KB890348.1 Bacteroides massiliensis B84634 = DSM 17679 genomic scaffold B035DRAFT_scaffold_35.36, whole genome shotgun sequence (41026 bp)
Overview 1 RT 1: 38118-41025 bp Neighborhood of RT #1 [38118, 41025] Gp49 HTH_XRE RVT-DGRs Feature: gene Location: 38118-38462 bp Feature: domain Description: Gp49 Location: 38172-38430 bp Feature: domain Description: Gp49 Location: 3 8172-3 843 0 bp Feature: gene Location: 38467-38778 bp Feature: domain Description: HTH_XRE Location: 38581-38734 bp Feature: domain Description: HTH_XRE Location: 3 8581-3 873 4 bp Feature: gene Location: 39025-40515 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 39412-40102 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3 9412-40102 bp Feature: gene Location: 40583-40795 bp Feature: gene Location: 40807-41025 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Gp49 (pfam05973), HTH_XRE (smart00530), RVT-DGRs

Seq: KB890401.1 Bacteroides massiliensis B84634 = DSM 17679 genomic scaffold B035DRAFT_scaffold_83.84, whole genome shotgun sequence (2491 bp)
Overview 1 RT 1: 61-2351 bp Neighborhood of RT #1 [61, 2377] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 61-222 bp Feature: gene Location: 542-2377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 836-1658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 836-1658 bp Feature: domain Description: Intron_maturas2 Location: 1817-2186 bp Feature: domain Description: Intron_maturas2 Location: 1817-2186 bp Feature: domain Description: HNHc Note: nucleases Location: 2210-2351 bp Feature: domain Description: HNHc Note: nucleases Location: 2210-2351 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)