myRT

myRT report for GCA_000373425.1_ASM37342v1

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Seq: KB891336.1 Rhizobium leguminosarum bv. viciae 128C53 genomic scaffold B062DRAFT_scaffold_10.11, whole genome shotgun sequence (219371 bp)
Overview 1 RT 1: 57232-65282 bp Neighborhood of RT #1 [57232, 65293] PRK09754 INT_C_like_1 RVT-UG8 PinE Feature: gene Location: 57232-58482 bp Feature: domain Description: PRK09754 Location: 57280-58450 bp Feature: domain Description: PRK09754 Location: 57280-58450 bp Feature: gene Location: 58835-60598 bp Feature: domain Description: INT_C_like_1 Location: 59942-60509 bp Feature: domain Description: INT_C_like_1 Location: 59942-60509 bp Feature: gene Location: 60795-62732 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 61293-61734 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 61 293-61 734 bp Feature: gene Location: 64039-64455 bp Feature: gene Location: 64715-65293 bp Feature: domain Description: PinE Location: 64718-65282 bp Feature: domain Description: PinE Location: 6471 8-65282 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09754 (phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional), INT_C_like_1 (cd01184), RVT-UG8, PinE (COG1961)

Seq: KB891341.1 Rhizobium leguminosarum bv. viciae 128C53 genomic scaffold B062DRAFT_scaffold_15.16, whole genome shotgun sequence (158048 bp)
Overview 1 RT 1: 80841-88633 bp Neighborhood of RT #1 [80841, 88704] Hpt1 RVT-Retrons KOG1803 KOG1803 MarR_2 PLDc_unchar5 PLDc_unchar5 Feature: gene Location: 80841-81701 bp Feature: domain Description: Hpt1 Location: 81252-81402 bp Feature: domain Description: Hpt1 Location: 812 52 -81402 bp Feature: gene Location: 81703-82059 bp Feature: gene Location: 82268-83323 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 82499-83036 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 82 499-83036 bp Feature: gene Location: 83519-86947 bp Feature: domain Description: KOG1803 Location: 85292-85922 bp Feature: domain Description: KOG1803 Location: 852 92 -8592 2 bp Feature: domain Description: KOG1803 Location: 86153-86783 bp Feature: domain Description: KOG1803 Location: 86153-86783 bp Feature: gene Location: 86944-88704 bp Feature: domain Description: MarR_2 Location: 87016-87166 bp Feature: domain Description: MarR_2 Location: 87016-87166 bp Feature: domain Description: PLDc_unchar5 Location: 87682-88081 bp Feature: domain Description: PLDc_unchar5 Location: 87682 -88081 bp Feature: domain Description: PLDc_unchar5 Location: 88276-88633 bp Feature: domain Description: PLDc_unchar5 Location: 882 76-88633 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Hpt1 (COG2236), RVT-Retrons, KOG1803 (KOG1803, DNA helicase ), MarR_2 (pfam12802), PLDc_unchar5 (cd09133)

Seq: KB891362.1 Rhizobium leguminosarum bv. viciae 128C53 genomic scaffold B062DRAFT_scaffold_34.35, whole genome shotgun sequence (56687 bp)
Overview 1 RT 1: 41-4964 bp Neighborhood of RT #1 [41, 5065] RVT-GII RES MarR_2 PLDc_unchar5 PLDc_unchar5 Feature: gene Location: 41-1864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 779-1469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 779-1469 bp Feature: gene Location: 1895-3295 bp Feature: domain Description: RES Location: 2627-3059 bp Feature: domain Description: RES Location: 2627-3 059 bp Feature: gene Location: 3359-5065 bp Feature: domain Description: MarR_2 Location: 3374-3497 bp Feature: domain Description: MarR_2 Location: 3 3 74-3 497 bp Feature: domain Description: PLDc_unchar5 Location: 4013-4412 bp Feature: domain Description: PLDc_unchar5 Location: 4013 -4412 bp Feature: domain Description: PLDc_unchar5 Location: 4607-4964 bp Feature: domain Description: PLDc_unchar5 Location: 4607-4964 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, RES (smart00953), MarR_2 (pfam12802), PLDc_unchar5 (cd09133)

Seq: KB891386.1 Rhizobium leguminosarum bv. viciae 128C53 genomic scaffold B062DRAFT_scaffold_56.57, whole genome shotgun sequence (15047 bp)
Overview 1 RT 1: 41-4606 bp Neighborhood of RT #1 [41, 5337] RVT-GII PLDc_unchar6 YbjD YbjD Feature: gene Location: 41-1864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 779-1469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 779-14 69 bp Feature: gene Location: 2006-3205 bp Feature: domain Description: PLDc_unchar6 Location: 2654-3029 bp Feature: domain Description: PLDc_unchar6 Location: 2654 -3029 bp Feature: gene Location: 3508-5337 bp Feature: domain Description: YbjD Location: 3511-3841 bp Feature: domain Description: YbjD Location: 3511-384 1 bp Feature: domain Description: YbjD Location: 4333-4606 bp Feature: domain Description: YbjD Location: 4 333-4 606 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PLDc_unchar6 (cd09176), YbjD (COG3593)