myRT

myRT report for GCA_000373745.1_ASM37374v1

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Seq: KB892290.1 Oligella ureolytica DSM 18253 genomic scaffold B092DRAFT_scaffold_19.20, whole genome shotgun sequence (52840 bp)
Overview 1 RT 1: 2-1734 bp Neighborhood of RT #1 [2, 1751] DDE_Tnp_IS66 RVT-GII GIIM InsE Feature: gene Location: 2-148 bp Feature: gene Location: 218-601 bp Feature: domain Description: DDE_Tnp_IS66 Location: 281-524 bp Feature: domain Description: DDE_Tnp_IS66 Location: 281 -524 bp Feature: gene Location: 609-1367 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 615-981 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 5-981 bp Feature: domain Description: GIIM Note: maturase Location: 1062-1287 bp Feature: domain Description: GIIM Note: maturase Location: 1 062-1 287 bp Feature: gene Location: 1380-1538 bp Feature: gene Location: 1548-1751 bp Feature: domain Description: InsE Location: 1584-1734 bp Feature: domain Description: InsE Location: 1 584-1 734 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388)

Seq: KB892326.1 Oligella ureolytica DSM 18253 genomic scaffold B092DRAFT_scaffold_51.52, whole genome shotgun sequence (11705 bp)
Overview 1 RT 1: 6122-11068 bp Neighborhood of RT #1 [6122, 11094] TIGR02646 COG3950 RVT-Retrons PRK09692 INT_P4_C INT_P4_C Feature: gene Location: 6122-6640 bp Feature: domain Description: TIGR02646 Location: 6125-6479 bp Feature: domain Description: TIGR02 646 Location: 612 5-6479 bp Feature: gene Location: 6759-8249 bp Feature: domain Description: COG3950 Location: 6951-8226 bp Feature: domain Description: COG3950 Location: 6951-82 2 6 bp Feature: gene Location: 8242-9315 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8485-9076 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8485-9076 bp Feature: gene Location: 9706-10602 bp Feature: domain Description: PRK09692 Location: 9829-10255 bp Feature: domain Description: PRK09692 Location: 982 9-102 55 bp Feature: domain Description: INT_P4_C Location: 10495-10597 bp Feature: domain Description: INT_P4_C Location: 10495-10597 bp Feature: gene Location: 10657-11094 bp Feature: domain Description: INT_P4_C Location: 10666-11068 bp Feature: domain Description: INT_P4_C Location: 10666-11068 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, PRK09692 (Integrase; provisional)