myRT

myRT report for GCA_000373785.1_ASM37378v1

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Seq: KB892378.1 Erysipelothrix tonsillarum DSM 14972 genomic scaffold B096DRAFT_scaffold_1.2, whole genome shotgun sequence (454198 bp)
Overview 1 RT 1: 175108-188238 bp Neighborhood of RT #1 [175108, 188291] PRK00024 COG4646 HELICc RVT-GII Intron_maturas2 HNHc PHA03411 COG4646 Cyt_C5_DNA_methylase Feature: gene Location: 175108-176952 bp Feature: domain Description: PRK00024 Location: 175693-176077 bp Feature: domain Description: PRK00024 Location: 1 75693-1 76077 bp Feature: gene Location: 177299-179692 bp Feature: domain Description: COG4646 Location: 177410-177830 bp Feature: domain Description: COG4646 Location: 1 7741 0-1 77830 bp Feature: domain Description: HELICc Location: 177911-178244 bp Feature: domain Description: HELICc Location: 1 7791 1 -1 78244 bp Feature: gene Location: 179696-181504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 179960-180779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 79960-1 80779 bp Feature: domain Description: Intron_maturas2 Location: 180848-181193 bp Feature: domain Description: Intron_maturas2 Location: 1 80848-1 81 1 93 bp Feature: domain Description: HNHc Note: nucleases Location: 181328-181475 bp Feature: domain Description: HNHc Note: nucleases Location: 1 81 328-1 81 475 bp Feature: gene Location: 182084-187309 bp Feature: domain Description: PHA03411 Location: 184472-184727 bp Feature: domain Description: PHA0341 1 Location: 1 84472-1 84727 bp Feature: domain Description: COG4646 Location: 185045-187295 bp Feature: domain Description: COG4646 Location: 1 85045-1 87295 bp Feature: gene Location: 187296-188291 bp Feature: domain Description: Cyt_C5_DNA_methylase Location: 187299-188238 bp Feature: domain Description: Cyt_C5_DNA_methylase Location: 1 87299-1 88238 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00024 (DNA repair protein RadC), COG4646 (Adenine-specific DNA methylase, N12 class ), HELICc (smart00490), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PHA03411 (putative methyltransferase; Provisional), Cyt_C5_DNA_methylase (cl30459)