myRT

myRT report for GCA_000374125.1_ASM37412v1

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Seq: KB893625.1 Niabella aurantiaca DSM 17617 genomic scaffold B160DRAFT_scaffold_0.1, whole genome shotgun sequence (1139839 bp)
Overview 1 RT 1: 976368-981896 bp Neighborhood of RT #1 [976368, 981896] Mrr_cat RVT-UG5 HTH_19 Feature: gene Location: 976368-976499 bp Feature: gene Location: 976527-977483 bp Feature: domain Description: Mrr_cat Location: 977118-977391 bp Feature: domain Description: Mrr_cat Location: 9771 1 8-977391 bp Feature: gene Location: 977655-980615 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 978120-978555 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 9781 20-978555 bp Feature: gene Location: 980689-981090 bp Feature: domain Description: HTH_19 Location: 980713-980905 bp Feature: domain Description: HTH_1 9 Location: 98071 3-980905 bp Feature: gene Location: 981270-981896 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Mrr_cat (pfam04471), RVT-UG5, HTH_19 (pfam12844)

Seq: KB893641.1 Niabella aurantiaca DSM 17617 genomic scaffold B160DRAFT_scaffold_23.24, whole genome shotgun sequence (8102 bp)
Overview 1 RT 1: 6172-8101 bp Neighborhood of RT #1 [6172, 8100] RVT-GII GIIM DUF4096 Feature: gene Location: 6172-6312 bp Feature: gene Location: 6504-6689 bp Feature: gene Location: 6643-7893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6760-7423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6760-742 3 bp Feature: domain Description: GIIM Note: maturase Location: 7504-7717 bp Feature: domain Description: GIIM Note: maturase Location: 7504-7717 bp Feature: gene Location: 7963-8100 bp Feature: domain Description: DUF4096 Location: 7987-8101 bp Feature: domain Description: DUF4096 Location: 7987-8101 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF4096 (pfam13340)

Seq: KB893645.1 Niabella aurantiaca DSM 17617 genomic scaffold B160DRAFT_scaffold_5.6, whole genome shotgun sequence (361130 bp)
Overview 1 RT 1: 260082-264174 bp Neighborhood of RT #1 [260082, 264308] RVT-GII GIIM PAS_like PAS_like Feature: gene Location: 260082-260225 bp Feature: gene Location: 260356-260646 bp Feature: gene Location: 260408-261745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 260612-261275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 260612-261275 bp Feature: domain Description: GIIM Note: maturase Location: 261356-261569 bp Feature: domain Description: GIIM Note: maturase Location: 2613 56-261569 bp Feature: gene Location: 261766-262707 bp Feature: gene Location: 262755-264308 bp Feature: domain Description: PAS_like Location: 262839-263760 bp Feature: domain Description: PAS_like Location: 26283 9-263 760 bp Feature: domain Description: PAS_like Location: 263769-264174 bp Feature: domain Description: PAS_like Location: 263 769-264174 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PAS_like (cd16025)