myRT

myRT report for GCA_000374365.1_ASM37436v1

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Seq: KB894115.1 Bacteroides gallinarum DSM 18171 genomic scaffold C233DRAFT_scaffold00001.1, whole genome shotgun sequence (403897 bp)
Overview 1 RT 1: 232508-236439 bp Neighborhood of RT #1 [232508, 236439] RVT-UG27 Feature: gene Location: 232508-233155 bp Feature: gene Location: 233169-233837 bp Feature: gene Location: 233830-235092 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 234022-234658 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 234022-234658 bp Feature: gene Location: 235413-235910 bp Feature: gene Location: 235960-236439 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: KB894125.1 Bacteroides gallinarum DSM 18171 genomic scaffold C233DRAFT_scaffold00011.11, whole genome shotgun sequence (116576 bp)
Overview 1 RT 1: 53475-59461 bp Neighborhood of RT #1 [53475, 59461] Relaxase Relaxase YWFCY RVT-GII Intron_maturas2 HNHc TraG-D_C Feature: gene Location: 53475-54725 bp Feature: domain Description: Relaxase Location: 53637-53958 bp Feature: domain Description: Relaxase Location: 53637-53958 bp Feature: domain Description: Relaxase Location: 54285-54519 bp Feature: domain Description: Relaxase Location: 542 85-54519 bp Feature: gene Location: 54759-55922 bp Feature: domain Description: YWFCY Location: 54765-54942 bp Feature: domain Description: YWFCY Location: 54765-54942 bp Feature: gene Location: 56484-58301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56751-57573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56751-57573 bp Feature: domain Description: Intron_maturas2 Location: 57645-57951 bp Feature: domain Description: Intron_maturas2 Location: 57645-57951 bp Feature: domain Description: HNHc Note: nucleases Location: 58122-58275 bp Feature: domain Description: HNHc Note: nucleases Location: 5812 2 -582 75 bp Feature: gene Location: 58265-59287 bp Feature: domain Description: TraG-D_C Location: 58643-58976 bp Feature: domain Description: TraG-D_C Location: 58643-58976 bp Feature: gene Location: 59294-59461 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Relaxase (pfam03432), YWFCY (pfam14293), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), TraG-D_C (pfam12696)

Seq: KB894126.1 Bacteroides gallinarum DSM 18171 genomic scaffold C233DRAFT_scaffold00012.12, whole genome shotgun sequence (116342 bp)
Overview 1 RT 1: 87177-90024 bp Neighborhood of RT #1 [87177, 90024] RVT-UG27 Feature: gene Location: 87177-87422 bp Feature: gene Location: 87457-88113 bp Feature: gene Location: 88154-89491 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 88421-89057 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 88421-89057 bp Feature: gene Location: 89537-89704 bp Feature: gene Location: 89773-90024 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: KB894132.1 Bacteroides gallinarum DSM 18171 genomic scaffold C233DRAFT_scaffold00018.18, whole genome shotgun sequence (103392 bp)
Overview 1 RT 1: 96211-101400 bp Neighborhood of RT #1 [96211, 101400] SSB_OBF SSB_OBF DUF1738 RVT-GII Intron_maturas2 HNHc MPTase-PolyVal Feature: gene Location: 96211-96825 bp Feature: domain Description: SSB_OBF Location: 96229-96430 bp Feature: domain Description: SSB_OBF Location: 96229-964 30 bp Feature: domain Description: SSB_OBF Location: 96538-96700 bp Feature: domain Description: SSB_OBF Location: 96538-96700 bp Feature: gene Location: 96831-97226 bp Feature: domain Description: DUF1738 Location: 96885-97200 bp Feature: domain Description: DUF1738 Location: 96885-97200 bp Feature: gene Location: 97763-99571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98027-98849 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98027-9884 9 bp Feature: domain Description: Intron_maturas2 Location: 98918-99230 bp Feature: domain Description: Intron_maturas2 Location: 98918-99230 bp Feature: domain Description: HNHc Note: nucleases Location: 99401-99554 bp Feature: domain Description: HNHc Note: nucleases Location: 994 01-99554 bp Feature: gene Location: 99561-100820 bp Feature: domain Description: MPTase-PolyVal Location: 99987-100299 bp Feature: domain Description: MPTase-PolyVal Location: 99987-100299 bp Feature: gene Location: 100999-101400 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SSB_OBF (cd04496), DUF1738 (pfam08401), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), MPTase-PolyVal (pfam18818)