myRT

myRT report for GCA_000374545.1_ASM37454v1

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Seq: KB894585.1 Anaeromusa acidaminophila DSM 3853 genomic scaffold C508DRAFT_scaffold00004.4, whole genome shotgun sequence (181599 bp)
Overview 1 RT 1: 73632-78548 bp Neighborhood of RT #1 [73632, 78553] eno RVT-GII GIIM HDGYP YvyF Feature: gene Location: 73632-74915 bp Feature: domain Description: eno Location: 73635-74910 bp Feature: domain Description: eno Location: 73635-7491 0 bp Feature: gene Location: 75174-75374 bp Feature: gene Location: 75398-76798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75713-76337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7571 3-76337 bp Feature: domain Description: GIIM Note: maturase Location: 76397-76622 bp Feature: domain Description: GIIM Note: maturase Location: 76397-76622 bp Feature: gene Location: 77243-77887 bp Feature: domain Description: HDGYP Location: 77324-77858 bp Feature: domain Description: HDGYP Location: 77324-77858 bp Feature: gene Location: 78206-78553 bp Feature: domain Description: YvyF Location: 78218-78548 bp Feature: domain Description: YvyF Location: 7821 8-78548 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT eno (TIGR01060), RVT-GII, GIIM (pfam08388), HDGYP (COG2206), YvyF (TIGR03826)

Seq: KB894601.1 Anaeromusa acidaminophila DSM 3853 genomic scaffold C508DRAFT_scaffold00020.20, whole genome shotgun sequence (65436 bp)
Overview 1 RT 1: 36252-40878 bp Neighborhood of RT #1 [36252, 40892] FGE-sulfatase Avd_like RVT-DGRs COG1878 DsrA Feature: gene Location: 36252-37334 bp Feature: domain Description: FGE-sulfatase Location: 36687-36999 bp Feature: domain Description: FGE-sulfatase Location: 36687-36999 bp Feature: gene Location: 37376-37714 bp Feature: domain Description: Avd_like Location: 37397-37700 bp Feature: domain Description: Avd_like Location: 37397-37700 bp Feature: gene Location: 37991-38992 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 38198-38855 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 38198-38855 bp Feature: gene Location: 39351-39995 bp Feature: domain Description: COG1878 Location: 39354-39981 bp Feature: domain Description: COG1878 Location: 39354-39981 bp Feature: gene Location: 40008-40892 bp Feature: domain Description: DsrA Location: 40050-40878 bp Feature: domain Description: DsrA Location: 40050-40878 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FGE-sulfatase (pfam03781), Avd_like (cd16376), RVT-DGRs, COG1878 (Kynurenine formamidase ), DsrA (COG2221)

Seq: KB894629.1 Anaeromusa acidaminophila DSM 3853 genomic scaffold C508DRAFT_scaffold00048.48, whole genome shotgun sequence (2482 bp)
Overview 1 RT 1: 129-2268 bp Neighborhood of RT #1 [129, 2268] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 129-1922 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 396-1209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 96-1209 bp Feature: domain Description: Intron_maturas2 Location: 1278-1569 bp Feature: domain Description: Intron_maturas2 Location: 1278-1569 bp Feature: domain Description: HNHc Note: nucleases Location: 1746-1902 bp Feature: domain Description: HNHc Note: nucleases Location: 1746-1902 bp Feature: gene Location: 2032-2268 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)