myRT

myRT report for GCA_000374765.1_ASM37476v1

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Seq: KB895232.1 Salinispora pacifica CNT045 genomic scaffold C554DRAFT_scaffold00026.26, whole genome shotgun sequence (82535 bp)
Overview 1 RT 1: 53887-60967 bp Neighborhood of RT #1 [53887, 60987] SalY SalY GIIM RVT-GII RVT-GII Inhibitor_I36 RpoE Feature: gene Location: 53887-56604 bp Feature: domain Description: SalY Location: 54715-55084 bp Feature: domain Description: SalY Location: 5471 5-55084 bp Feature: domain Description: SalY Location: 56125-56476 bp Feature: domain Description: SalY Location: 561 25-56476 bp Feature: gene Location: 57329-57679 bp Feature: domain Description: GIIM Note: maturase Location: 57332-57548 bp Feature: domain Description: GIIM Note: maturase Location: 57332-57548 bp Feature: gene Location: 57646-58068 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57649-57946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57649-57946 bp Feature: gene Location: 58068-58457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58128-58455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 581 28-58455 bp Feature: gene Location: 59353-60024 bp Feature: domain Description: Inhibitor_I36 Location: 59731-59938 bp Feature: domain Description: Inhibitor_I36 Location: 59731 -59938 bp Feature: gene Location: 60208-60987 bp Feature: domain Description: RpoE Location: 60454-60967 bp Feature: domain Description: RpoE Location: 60454-60967 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SalY (COG0577), GIIM (pfam08388), RVT-GII, Inhibitor_I36 (pfam03995), RpoE (COG3343)

Seq: KB895247.1 Salinispora pacifica CNT045 genomic scaffold C554DRAFT_scaffold00041.41, whole genome shotgun sequence (39798 bp)
Overview 1 RT 1: 24727-28153 bp Neighborhood of RT #1 [24727, 28153] PTPS PTPS NrdG RVT-CRISPR-like YfmG Feature: gene Location: 24727-25479 bp Feature: domain Description: PTPS Location: 24739-25063 bp Feature: domain Description: PTPS Location: 2 4739-2 5063 bp Feature: domain Description: PTPS Location: 25138-25471 bp Feature: domain Description: PTPS Location: 2 5138-2 5471 bp Feature: gene Location: 25476-26192 bp Feature: domain Description: NrdG Location: 25515-26175 bp Feature: domain Description: NrdG Location: 2 5515-2 6175 bp Feature: gene Location: 26251-27117 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 26554-27073 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2 6554-2 7073 bp Feature: gene Location: 27120-27674 bp Feature: domain Description: YfmG Location: 27255-27666 bp Feature: domain Description: YfmG Location: 2 72 55-2 7666 bp Feature: gene Location: 27671-28153 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PTPS (pfam01242), NrdG (TIGR02491), RVT-CRISPR, YfmG (COG1262)