myRT

myRT report for GCA_000378645.1_ASM37864v1

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Seq: KB900157.1 Salinispora arenicola CNH877 genomic scaffold F581DRAFT_scaffold00019.19, whole genome shotgun sequence (115856 bp)
Overview 1 RT 1: 3-2687 bp Neighborhood of RT #1 [3, 2687] RVT-GII Intron_maturas2 Feature: gene Location: 3-1106 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48-678 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48-678 bp Feature: domain Description: Intron_maturas2 Location: 780-1014 bp Feature: domain Description: Intron_maturas2 Location: 780-1 01 4 bp Feature: gene Location: 2283-2417 bp Feature: gene Location: 2490-2687 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: KB900201.1 Salinispora arenicola CNH877 genomic scaffold F581DRAFT_scaffold00063.63, whole genome shotgun sequence (6961 bp)
Overview 1 RT 1: 72-4954 bp Neighborhood of RT #1 [72, 4954] DDE_5 COG5659 COG5659 RVT-GII Feature: gene Location: 72-1460 bp Feature: domain Description: DDE_5 Location: 135-1038 bp Feature: domain Description: DDE_5 Location: 135-1038 bp Feature: domain Description: COG5659 Location: 1212-1437 bp Feature: domain Description: COG5659 Location: 12 12 -1437 bp Feature: gene Location: 1585-2415 bp Feature: domain Description: COG5659 Location: 1606-2203 bp Feature: domain Description: COG5659 Location: 1606-2 2 03 bp Feature: gene Location: 3090-3767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3351-3765 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3351-3765 bp Feature: gene Location: 3882-4538 bp Feature: gene Location: 4721-4954 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5659 (SRSO17 transposase ), RVT-GII, DDE_5 (pfam13546)

Seq: KB900222.1 Salinispora arenicola CNH877 genomic scaffold F581DRAFT_scaffold00084.84, whole genome shotgun sequence (1681 bp)
Overview 1 RT 1: 197-1528 bp Neighborhood of RT #1 [197, 1548] RVT-GII Intron_maturas2 KOG4768 Feature: gene Location: 197-1333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 206-827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 206-827 bp Feature: domain Description: Intron_maturas2 Location: 932-1151 bp Feature: domain Description: Intron_maturas2 Location: 93 2-1151 bp Feature: gene Location: 1384-1548 bp Feature: domain Description: KOG4768 Location: 1390-1528 bp Feature: domain Description: KOG4768 Location: 13 90-1528 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG4768 (KOG4768, Mitochondrial mRNA maturase ), RVT-GII, Intron_maturas2 (pfam01348)

Seq: KB900231.1 Salinispora arenicola CNH877 genomic scaffold F581DRAFT_scaffold00093.93, whole genome shotgun sequence (1060 bp)
Overview 1 RT 1: 538-1054 bp Neighborhood of RT #1 [538, 1059] RVT-GII Feature: gene Location: 538-1059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 799-1054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 799-1054 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII