myRT

myRT report for GCA_000379165.1_ASM37916v1

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Seq: KB900629.1 Teredinibacter turnerae T7902 genomic scaffold YUKDRAFT_scaffold_0.1, whole genome shotgun sequence (353642 bp)
Overview 1 RT 1: 249463-255542 bp Neighborhood of RT #1 [249463, 255542] PRK14975 RVT-UG9 Feature: gene Location: 249463-250680 bp Feature: gene Location: 250832-252214 bp Feature: domain Description: PRK14975 Location: 251102-252131 bp Feature: domain Description: PRK1 4975 Location: 251 1 02-2521 31 bp Feature: gene Location: 252399-254051 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 252621-253254 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 252621 -253254 bp Feature: gene Location: 254189-254713 bp Feature: gene Location: 255135-255542 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK14975 (bifunctional 3'-5' exonuclease/DNA polymerase; Provisional), RVT-UG9

Seq: KB900638.1 Teredinibacter turnerae T7902 genomic scaffold YUKDRAFT_scaffold_17.18, whole genome shotgun sequence (100618 bp)
Overview 1 RT 1: 66476-72166 bp Neighborhood of RT #1 [66476, 72255] IS5 RVT-UG8 RVT-UG3 HTH_ARSR Feature: gene Location: 66476-67417 bp Feature: domain Description: IS5 Location: 66662-67391 bp Feature: domain Description: IS5 Location: 66662 -67391 bp Feature: gene Location: 67489-67638 bp Feature: gene Location: 67815-69767 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 68334-68769 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 68334-68769 bp Feature: gene Location: 69760-70995 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 70048-70537 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 70048-70537 bp Feature: gene Location: 71380-71568 bp Feature: gene Location: 71926-72255 bp Feature: domain Description: HTH_ARSR Location: 71962-72166 bp Feature: domain Description: HTH_ARSR Location: 71962 -72 166 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS5 (COG3039), RVT-UG8, RVT-UG3, HTH_ARSR (smart00418)

Seq: KB900648.1 Teredinibacter turnerae T7902 genomic scaffold YUKDRAFT_scaffold_26.27, whole genome shotgun sequence (61610 bp)
Overview 1 RT 1: 192-3495 bp Neighborhood of RT #1 [192, 3495] CcdA RVT-GII GIIM Feature: gene Location: 192-437 bp Feature: domain Description: CcdA Location: 225-435 bp Feature: domain Description: CcdA Location: 225-43 5 bp Feature: gene Location: 612-908 bp Feature: gene Location: 1567-2886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1822-2488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1822-2488 bp Feature: domain Description: GIIM Note: maturase Location: 2584-2785 bp Feature: domain Description: GIIM Note: maturase Location: 2584-2785 bp Feature: gene Location: 2994-3314 bp Feature: gene Location: 3361-3495 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CcdA (pfam07362), RVT-GII, GIIM (pfam08388)

Seq: KB900685.1 Teredinibacter turnerae T7902 genomic scaffold YUKDRAFT_scaffold_6.7, whole genome shotgun sequence (233592 bp)
Overview 1 RT 1: 72409-78651 bp Neighborhood of RT #1 [72409, 78929] CRISPR_Cas6 RVT-CRISPR Cmr1 Feature: gene Location: 72409-72711 bp Feature: gene Location: 72854-73351 bp Feature: gene Location: 75050-77071 bp Feature: domain Description: CRISPR_Cas6 Location: 75614-75908 bp Feature: domain Description: CRISPR_Cas6 Location: 75614 -75908 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 76241-76778 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 7624 1-76778 bp Feature: gene Location: 77440-77625 bp Feature: gene Location: 77520-78929 bp Feature: domain Description: Cmr1 Location: 77613-78651 bp Feature: domain Description: Cmr1 Location: 77613-78651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CRISPR_Cas6 (pfam10040), RVT-CRISPR, Cmr1 (COG1367)