myRT

myRT report for GCA_000379765.1_ASM37976v1

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Seq: KB903476.1 Flexithrix dorotheae DSM 6795 genomic scaffold A3EMDRAFT_scaffold_5.6, whole genome shotgun sequence (534137 bp)
Overview 1 RT 1: 37274-45510 bp Neighborhood of RT #1 [37274, 45515] PRK06148 PRK06148 KOG3216 RVT-GII GIIM HTH_XRE COG3800 PRK09255 Feature: gene Location: 37274-39535 bp Feature: domain Description: PRK06148 Location: 37286-38249 bp Feature: domain Description: PRK061 48 Location: 37286-38249 bp Feature: domain Description: PRK06148 Location: 38282-39530 bp Feature: domain Description: PRK061 48 Location: 38282-39530 bp Feature: gene Location: 39615-40064 bp Feature: domain Description: KOG3216 Location: 39627-40053 bp Feature: domain Description: KOG321 6 Location: 39627-40053 bp Feature: gene Location: 40244-41614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40577-41222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40577-41 222 bp Feature: domain Description: GIIM Note: maturase Location: 41303-41513 bp Feature: domain Description: GIIM Note: maturase Location: 41 303-41 51 3 bp Feature: gene Location: 42147-43634 bp Feature: domain Description: HTH_XRE Location: 42183-42354 bp Feature: domain Description: HTH_XRE Location: 421 83-42354 bp Feature: domain Description: COG3800 Location: 42573-42996 bp Feature: domain Description: COG3800 Location: 42573-42996 bp Feature: gene Location: 43908-45515 bp Feature: domain Description: PRK09255 Location: 43926-45510 bp Feature: domain Description: PRK09255 Location: 43926-4551 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06148 (hypothetical protein; Provisional), KOG3216 (KOG3216, Diamine acetyltransferase ), RVT-GII, GIIM (pfam08388), HTH_XRE (smart00530), COG3800 (Predicted transcriptional regulator ), PRK09255 (malate synthase; Validated)

Seq: KB903506.1 Flexithrix dorotheae DSM 6795 genomic scaffold A3EMDRAFT_scaffold_77.78, whole genome shotgun sequence (6377 bp)
Overview 1 RT 1: 4067-6022 bp Neighborhood of RT #1 [4067, 6022] HTH_Tnp_1 RVT-GII GIIM Feature: gene Location: 4067-4300 bp Feature: domain Description: HTH_Tnp_1 Location: 4073-4271 bp Feature: domain Description: HTH_Tnp_1 Location: 4073-42 71 bp Feature: gene Location: 4310-4597 bp Feature: gene Location: 4619-5233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4676-4877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4676-4877 bp Feature: domain Description: GIIM Note: maturase Location: 4931-5162 bp Feature: domain Description: GIIM Note: maturase Location: 4931-5162 bp Feature: gene Location: 5460-5627 bp Feature: gene Location: 5768-6022 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), RVT-GII, GIIM (pfam08388)