myRT

myRT report for GCA_000380185.1_ASM38018v1

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Seq: KB904747.1 Thiothrix flexilis DSM 14609 genomic scaffold A3IKDRAFT_scaffold_1.2, whole genome shotgun sequence (252197 bp)
Overview 1 RT 1: 36667-45652 bp Neighborhood of RT #1 [36667, 45798] glyQ glyS CRISPR_Cas6 RVT-CRISPR TIGR03986 RAMP_I_III RAMP_I_III Feature: gene Location: 36667-37608 bp Feature: domain Description: glyQ Location: 36715-37585 bp Feature: domain Description: glyQ Location: 3671 5-37585 bp Feature: gene Location: 37612-39666 bp Feature: domain Description: glyS Location: 37618-39661 bp Feature: domain Description: glyS Location: 3761 8-39661 bp Feature: gene Location: 40590-42077 bp Feature: domain Description: CRISPR_Cas6 Location: 41301-41454 bp Feature: domain Description: CRISPR_Cas6 Location: 41 301 -41 454 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 41730-42054 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 41 730-42054 bp Feature: gene Location: 42182-44395 bp Feature: domain Description: TIGR03986 Location: 42206-44039 bp Feature: domain Description: TIGR03986 Location: 42206-44039 bp Feature: gene Location: 44392-45798 bp Feature: domain Description: RAMP_I_III Location: 44446-44965 bp Feature: domain Description: RAMP_I_III Location: 44446-44965 bp Feature: domain Description: RAMP_I_III Location: 45247-45652 bp Feature: domain Description: RAMP_I_III Location: 45247-45652 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT glyQ (TIGR00388), glyS (TIGR00211), CRISPR_Cas6 (pfam10040), RVT-CRISPR, TIGR03986 (CRISPR-associated protein), RAMP_I_III (cl21471)

Seq: KB904782.1 Thiothrix flexilis DSM 14609 genomic scaffold A3IKDRAFT_scaffold_41.42, whole genome shotgun sequence (19107 bp)
Overview 1 RT 1: 412-10703 bp Neighborhood of RT #1 [412, 10732] InsA DUF393 RVT-Retrons WD40 WD40 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 Feature: gene Location: 412-723 bp Feature: domain Description: InsA Location: 415-691 bp Feature: domain Description: InsA Location: 415-691 bp Feature: gene Location: 793-1071 bp Feature: domain Description: DUF393 Location: 808-1066 bp Feature: domain Description: DUF393 Location: 808-1066 bp Feature: gene Location: 1258-2541 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1702-2326 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1702 -2 32 6 bp Feature: gene Location: 2547-4382 bp Feature: gene Location: 4379-10732 bp Feature: domain Description: WD40 Location: 4724-4997 bp Feature: domain Description: WD40 Location: 472 4-4997 bp Feature: domain Description: WD40 Location: 5060-5303 bp Feature: domain Description: WD40 Location: 5060-5303 bp Feature: domain Description: HEAT_2 Location: 5342-5579 bp Feature: domain Description: HEAT_2 Location: 5342 -5579 bp Feature: domain Description: HEAT_2 Location: 5618-5786 bp Feature: domain Description: HEAT_2 Location: 5618-5786 bp Feature: domain Description: HEAT_2 Location: 6155-6401 bp Feature: domain Description: HEAT_2 Location: 6155-6401 bp Feature: domain Description: HEAT_2 Location: 6734-6983 bp Feature: domain Description: HEAT_2 Location: 6734-6983 bp Feature: domain Description: HEAT_2 Location: 7178-7385 bp Feature: domain Description: HEAT_2 Location: 7178-7385 bp Feature: domain Description: HEAT_2 Location: 8042-8198 bp Feature: domain Description: HEAT_2 Location: 8042 -8198 bp Feature: domain Description: HEAT_2 Location: 9149-9401 bp Feature: domain Description: HEAT_2 Location: 9149-9401 bp Feature: domain Description: HEAT_2 Location: 9560-9704 bp Feature: domain Description: HEAT_2 Location: 9560-9704 bp Feature: domain Description: HEAT_2 Location: 10520-10703 bp Feature: domain Description: HEAT_2 Location: 1052 0-10703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsA (COG3677), DUF393 (pfam04134), RVT-Retrons, WD40 (smart00320), HEAT_2 (pfam13646)