myRT

myRT report for GCA_000381065.1_ASM38106v1

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Seq: KB905839.1 Zymophilus raffinosivorans DSM 20765 genomic scaffold F606DRAFT_scaffold00001.1, whole genome shotgun sequence (349422 bp)
Overview 1 RT 1: 153130-156474 bp Neighborhood of RT #1 [153130, 156776] COG4584 COG4584 IstB_IS21_ATP IstB_IS21 RVT-GII GIIM rve Feature: gene Location: 153130-154668 bp Feature: domain Description: COG4584 Location: 153235-153925 bp Feature: domain Description: COG4584 Location: 1 53235-1 53925 bp Feature: domain Description: COG4584 Location: 154147-154546 bp Feature: domain Description: COG4584 Location: 1 541 47-1 54546 bp Feature: gene Location: 154658-155410 bp Feature: domain Description: IstB_IS21_ATP Location: 154730-154811 bp Feature: domain Description: IstB_IS21 _ATP Location: 1 54730-1 5481 1 bp Feature: domain Description: IstB_IS21 Location: 154823-155345 bp Feature: domain Description: IstB_IS21 Location: 1 54823-1 55345 bp Feature: gene Location: 155553-155786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 155559-155688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 55559-1 55688 bp Feature: gene Location: 155840-156073 bp Feature: domain Description: GIIM Note: maturase Location: 155849-155987 bp Feature: domain Description: GIIM Note: maturase Location: 1 55849-1 55987 bp Feature: gene Location: 156156-156776 bp Feature: domain Description: rve Location: 156168-156474 bp Feature: domain Description: rve Location: 1 561 68-1 56474 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4584 (Transposase ), IstB_IS21_ATP (pfam08483), IstB_IS21 (pfam01695), RVT-GII, GIIM (pfam08388), rve (pfam00665)

Seq: KB905872.1 Zymophilus raffinosivorans DSM 20765 genomic scaffold F606DRAFT_scaffold00034.34, whole genome shotgun sequence (31040 bp)
Overview 1 RT 1: 10483-18027 bp Neighborhood of RT #1 [10483, 18035] HTH_17 HTH_17 RVT-GII GIIM RVT-GII GIIM RVT-GII GGDEF PRK05290 Feature: gene Location: 10483-10659 bp Feature: domain Description: HTH_17 Location: 10504-10645 bp Feature: domain Description: HTH_17 Location: 10504-10645 bp Feature: gene Location: 10781-10972 bp Feature: domain Description: HTH_17 Location: 10805-10952 bp Feature: domain Description: HTH_17 Location: 10805-10952 bp Feature: gene Location: 11048-11665 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11078-11219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11078-112 19 bp Feature: domain Description: GIIM Note: maturase Location: 11270-11501 bp Feature: domain Description: GIIM Note: maturase Location: 112 70-11501 bp Feature: gene Location: 11718-13082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12039-12696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 039-12 696 bp Feature: domain Description: GIIM Note: maturase Location: 12777-13008 bp Feature: domain Description: GIIM Note: maturase Location: 12 777-13008 bp Feature: gene Location: 13176-13505 bp Feature: gene Location: 13475-14293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13793-14267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13793-142 67 bp Feature: gene Location: 14981-16114 bp Feature: domain Description: GGDEF Location: 15656-16109 bp Feature: domain Description: GGDEF Location: 15656-16109 bp Feature: gene Location: 16404-18035 bp Feature: domain Description: PRK05290 Location: 16413-18027 bp Feature: domain Description: PRK052 90 Location: 16413-1802 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_17 (pfam12728), RVT-GII, GIIM (pfam08388), GGDEF (TIGR00254), PRK05290 (hybrid cluster protein; Provisional)