myRT

myRT report for GCA_000381365.1_Bact_saly_DSM_18765_V1

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Seq: KB905470.1 Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 genomic scaffold acAqE-supercont1.5, whole genome shotgun sequence (116045 bp)
Overview 1 RT 1: 52722-58548 bp Neighborhood of RT #1 [52722, 59234] TraG-D_C RVT_N RVT-GII GIIM YWFCY Relaxase Feature: gene Location: 52722-53477 bp Feature: gene Location: 53530-54699 bp Feature: domain Description: TraG-D_C Location: 54076-54406 bp Feature: domain Description: TraG-D_C Location: 54076-54406 bp Feature: gene Location: 54740-56392 bp Feature: RT Description: RVT_N Location: 54794-55037 bp Feature: RT Description: RVT_N Location: 54794-55037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55082-55730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55082-55730 bp Feature: domain Description: GIIM Note: maturase Location: 55784-56015 bp Feature: domain Description: GIIM Note: maturase Location: 55784-5601 5 bp Feature: gene Location: 57030-57956 bp Feature: domain Description: YWFCY Location: 57039-57216 bp Feature: domain Description: YWFCY Location: 57039-5721 6 bp Feature: gene Location: 57987-59234 bp Feature: domain Description: Relaxase Location: 58014-58548 bp Feature: domain Description: Relaxase Location: 5801 4-58548 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), YWFCY (pfam14293), Relaxase (pfam03432)

Seq: KB905467.1 Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 genomic scaffold acAqE-supercont1.2, whole genome shotgun sequence (1584616 bp)
Overview 1 RT 1: 1421063-1426404 bp Neighborhood of RT #1 [1421063, 1430525] RVT-DGRs Laminin_G_3 Laminin_G_3 Feature: gene Location: 1421063-1421305 bp Feature: gene Location: 1421485-1421970 bp Feature: gene Location: 1421967-1423271 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1422177-1422855 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 142 2 177-142 2 855 bp Feature: gene Location: 1423597-1423791 bp Feature: gene Location: 1423788-1430525 bp Feature: domain Description: Laminin_G_3 Location: 1425249-1425327 bp Feature: domain Description: Laminin_G_3 Location: 142 52 49-142 532 7 bp Feature: domain Description: Laminin_G_3 Location: 1425978-1426404 bp Feature: domain Description: Laminin_G_3 Location: 142 5978-142 6404 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Laminin_G_3 (pfam13385)